Aciduliprofundum boonei: Aboo_1090
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Entry
Aboo_1090 CDS
T01180
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
abi
Aciduliprofundum boonei
Pathway
abi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Aboo_1090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abi03021
]
Aboo_1090
Enzymes [BR:
abi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Aboo_1090
Transcription machinery [BR:
abi03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Aboo_1090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
DUF3659
Motif
Other DBs
NCBI-ProteinID:
ADD08899
UniProt:
D3T9X0
LinkDB
All DBs
Position
complement(1045102..1047789)
Genome browser
AA seq
895 aa
AA seq
DB search
MSHHIFGLTKRINSIKFALLSPEEIRRMSAVKVITADTYDDDGFPIDKGLMDLHMGVIEP
GLRCKTCGGKVDECPGHFGHIELAMPVIHVGFVKNIKNYLDATCRECGRIKLKDDEIEIY
KQKIEEAKKMGASPLELLFITKKIIDDASSRPICPHCGAEQKKITLDKPTTFREEGRKLT
PKEIRERLERIPDEDLPLLGMNPETARPEWMVLTVLPVPPVNVRPTITLETGERSEDDLT
HKLVDIIRINQRLRENRDSGAPQLIIEDLWELLQYHVTTYFDNQTSGIPPARHRSGRPLK
TLVQRLKGKEGRFRSNLSGKRVNFSARTVISPEPFLSINEVGVPEAAARELTVPITVTEY
NIEKMKEIVRRGSNPKGDKYLPGANYVIRPDGRRIKITDRNAEDVSKKLDIGWVVERHLI
DGDVVLFNRQPSLHRMSMMGHLVKVMPNRTFRFNLAVCPPYNADFDGDEMNLHVLQSEEA
RAEAKILMLVQEHILSPRFGGPIIGGIHDHITAMFLLTHKNPKFTKEQAIHMLSYLDYDE
LPEPHKDENGNEFYYGKELFSLILPKDLNMEFKSKICDPSVCNNKCVHEACPIDAYVVIR
NGKLVAGTIDENAIGSMKGKLLDRIAKRGSKEAREFIDNMTRLAVGVISYRGFTSGIDDE
DIPEEAIIQIHEIIKESIKKTDELIELYKQGLLQPAPGRSVEETLEMEIMRVLAHARDEA
GKIASKHLGLENSSVIMARSGARASMLNLSQMAGSIGQQSVRGQRLHRGYQDRTLPHFKR
GDLGALARGFVESSYKKGLSPTEYFFHSMGGREGLVDTAVRTSRSGYMQRRLINALEDLK
VIEDGKVVDTAGNVVQFIYGEDGVDPTRSSGGENVNMDEILTDVLGDKYLLRRRK
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgagccatcacatttttggattgacaaagagaattaattccataaaattcgctttatta
tctcccgaagagattaggagaatgagtgcagtaaaggtaataacagcagatacctatgat
gatgacggttttcccatagacaagggccttatggacttgcacatgggcgtaattgagcct
ggattgagatgcaaaacatgcggaggtaaggtagatgaatgccctggacactttgggcat
atagaactcgctatgccggtcatccatgtgggtttcgtaaaaaacattaaaaattacctt
gatgctacctgtcgtgaatgtggcaggataaagctcaaggatgatgaaattgaaatttac
aagcagaagatagaagaagcgaagaaaatgggagcctcgccattagaattgctctttata
acaaagaagataatagatgatgcctcctctcgcccaatatgtcctcattgtggtgcagaa
cagaaaaaaatcacactggacaagcctacaacatttagagaagagggcagaaaattaact
ccaaaggagattcgtgagagattggagcgcatacctgacgaggatctacctttacttgga
atgaatcccgaaactgctaggcctgagtggatggttctgactgttcttcctgtgcccccc
gtcaatgtgaggcccactataaccctcgaaacgggagagagaagcgaagatgatttaacg
cacaagctcgtggatataataaggatcaaccaaagattgagagaaaacagagacagtgga
gcaccacaactcataattgaagatttatgggaactcttgcagtaccatgttaccacctac
tttgataatcaaacctctggtataccacctgcaaggcatcgcagtggcagacctctcaaa
actcttgtgcagcgtctgaaaggaaaagaaggaagattcagatccaacttgtctggtaag
agagttaatttctcagcccgtacagtcatatccccagaaccatttctttcgataaatgaa
gttggcgtgcctgaggcggctgctagagagcttactgtacctataacagttacggagtat
aatattgagaagatgaaagaaattgttagaagaggttcaaatccaaagggagataaatac
ctgccaggtgcaaattatgttattagacctgatggaaggaggataaagataacagataga
aatgcagaagatgtctcaaagaaacttgatatcggctgggttgtagagaggcatctcata
gatggggatgtagtgctgtttaataggcagccatctctgcataggatgagcatgatgggt
catctcgtaaaagtcatgccaaatcgcacattccgcttcaaccttgcagtttgcccacct
tataatgctgatttcgatggagatgagatgaatcttcatgtgctccagagcgaggaggca
agggctgaagcgaagattttaatgcttgtgcaagagcatattttatctccgagatttggt
ggtccgattataggcggcatacacgaccacataactgcaatgttcttgcttactcataaa
aatccaaaattcacaaaggagcaagcaatccatatgctatcttacttggattatgacgag
cttccagagccgcataaggacgagaatggaaacgaattttactacggcaaagagctattc
tccttaattcttccaaaggatttaaatatggaattcaagagcaagatttgtgacccatct
gtgtgcaacaacaaatgtgtgcatgaagcttgcccgatagatgcttatgtggtaattcgc
aatggaaaacttgtggcaggtacaatagatgaaaatgcgattggttcaatgaagggtaaa
ttgcttgatagaatagcaaaaagaggtagcaaagaagcgcgtgagttcatagacaatatg
acaagattggcagtgggagtaatatcctatcgcggtttcacttcaggaatagatgatgaa
gatatacctgaagaggctattatccagattcatgaaataataaaagaatcaataaagaaa
acggacgaattgattgaattatataagcaaggcctattgcaaccagctcctggaagaagt
gtagaagaaactttagaaatggagataatgcgcgtgctagcacatgcaagagatgaagcg
ggtaagatagctagcaagcatttaggtttagagaattcatcggttattatggcaagaagc
ggagctagagcatccatgctcaacctatcccagatggctggaagcattggacagcagtct
gtgagaggtcaaagattacatcgcggttatcaagatcgcacgctaccacattttaaacgt
ggagatttaggtgccctagcaaggggatttgtagaatcctcttacaagaagggcttgagt
ccaacagagtatttcttccactcaatgggtggacgagagggcttagtggatactgcagtt
cgtacatcccgcagtggttatatgcagagaagattaatcaatgcccttgaggatttgaaa
gttatagaggatggaaaagttgtggatactgcgggcaatgttgtgcagttcatttacgga
gaggatggtgttgaccccactcgcagttcaggtggagaaaatgtaaatatggatgagatt
ctaacggatgttcttggagacaagtatcttttaaggaggaggaagtaa
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