Aciduliprofundum boonei: Aboo_1327
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Entry
Aboo_1327 CDS
T01180
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
abi
Aciduliprofundum boonei
Brite
KEGG Orthology (KO) [BR:
abi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abi03016
]
Aboo_1327
Enzymes [BR:
abi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Aboo_1327
Transfer RNA biogenesis [BR:
abi03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Aboo_1327
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
DUF6671
TMEM70
Motif
Other DBs
NCBI-ProteinID:
ADD09135
UniProt:
D3TAK6
LinkDB
All DBs
Position
complement(1269201..1269716)
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AA seq
171 aa
AA seq
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MRTFIAIEIPFFREIEELQKSIEGRAKLVEEENMHITLKFLGEIEEKLIEKIKKIVEECK
VDKFKISLQGVGFFPNERYIRVIWIGIDGYEPIVKMAKCIDEKLSKLGFEREKGYVPHLT
VARAKGRVSIMNYDRFKNLKFGEVDVREVKIKNSTLTPKGPIYEDVAVIQL
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacattcatagccattgaaattccgttctttagagagattgaggaattgcaaaaa
agcatagagggcagggcaaaattggtagaagaggagaatatgcacataaccctgaaattt
ttgggagagatagaggaaaaattaatagaaaaaataaaaaaaatcgtggaagagtgtaaa
gtggataagtttaaaatatccttgcaaggcgttggttttttcccaaatgagagatacatt
agggtaatttggatcggcattgatggctacgagcccatagtcaaaatggcaaaatgcata
gatgagaaactatccaagcttggatttgagagagagaaaggctatgtacctcatctcact
gtggctagggcaaaggggagagtatccataatgaattatgatagattcaaaaatttgaaa
tttggggaagtggatgtcagagaggtaaaaataaaaaatagcacactaactcccaaaggg
ccaatttacgaggatgtcgcagttattcaactgtaa
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