Aciduliprofundum boonei: Aboo_1478
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Entry
Aboo_1478 CDS
T01180
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
abi
Aciduliprofundum boonei
Pathway
abi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
abi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Aboo_1478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abi03400
]
Aboo_1478
DNA repair and recombination proteins [BR:
abi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Aboo_1478
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
AAA_27
Motif
Other DBs
NCBI-ProteinID:
ADD09284
UniProt:
B5ICV6
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Position
1419588..1422074
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AA seq
828 aa
AA seq
DB search
MATPLMRQYHRIKAKYKDTILFFRVGDFYETFEDDAKLVSKELNIVLTRRSKDEPVPMAG
IPYHALDAYLSRLVKKGYKVAICEQLEDPAKARGLVRRDVVRVVTPGTLIEDTLLTEDNN
FLFSIYKHKEIYGFAALDISTGEFFAGELDFYGLNAEILRLQPSEILSNSKLNLDFQIKI
LAEEYYNDYEKILKEHFKVAELSGFGIGEYGLRAAASALKYAKENTMNDLKNITSLQGYF
KDKYLILDSTTLKNLEIFHNVLGEDKYTLYHTMNKCETPMGARLLKRWMQRPLKDIDEIN
DRLDAVEELANKQLLQDSIRTILSRIKDIERIKTRVSLGRAAPRDLISLKESLKQADKLR
INFESKILKNSASKIYGIEGIIELIENAINGDYPVGEGVIKEGYNEELDEIKRIASNAKL
LIGKMEERERRNTGIKNLKIGYNDVMGYYIEVSKSNLSKVPKHYRRKQTLKNSERFVTDE
LKELEYKILSAKDRIYEIENKIYRDILKKLGEMIDVIERTAKSIAIIDVISSLARVALEM
NYTRPEVDESMDIEIRNGRHPVVELYTDFVPNDTHINSDARFIILTGPNMAGKSTYMRQV
ALIVILAQMGSFVPADYAKIGIVDRIYTRVGASDDITRGRSTFMMEMVELANILNTATER
SLILLDEIGRGTSTYDGLAIAWSITEHIHNSIRARTIFATHYHHLIDLENVLDNVRNYHI
AVKETQDGLIFVRKVMPGGMSKSYGIEVAKLAGVPEKVVKRAKEILNLIEEEKVIEVRRG
KKIIQTMLFGEENCSDILDEIKRMDIMNLTPLEALNKLNELKRKIENR
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggctactcctctcatgaggcaatatcatagaataaaggcgaagtacaaagatacaata
ttattttttcgtgtgggagatttctacgaaacatttgaagatgatgcaaaactagtttca
aaagaattgaacatagtgctaacgaggagaagcaaggatgagcctgtgcctatggctggt
ataccatatcatgctcttgatgcatatttgtctcgtctagttaaaaagggctacaaggtt
gcaatatgtgagcaactggaagatccagcaaaggcgagaggactggttaggagagatgta
gtgcgggtagtcactcctggtacattgattgaagatactttgctaacggaggataacaat
tttcttttttcaatttataagcataaggagatttatggatttgctgcattagacatctcc
acaggagagttctttgctggagagttagatttttatggattaaatgcagaaattctgcgt
cttcaaccctccgaaatactatccaattcgaaattaaatttggattttcaaattaaaata
ttggcagaagaatattacaatgattatgagaaaatcttaaaagagcattttaaagtggct
gaattaagtggtttcggaataggagaatatggtctgagggctgcagcatctgctctgaaa
tatgccaaagagaatacgatgaacgatttaaaaaatataacatctctacagggttatttt
aaagataaatatcttattttagattccacaactcttaaaaatttagaaatttttcataat
gtactgggagaggataaatacactctttatcacacaatgaataaatgtgaaacacccatg
ggtgcaagattactaaaaagatggatgcaaagaccattgaaagatatagatgaaataaac
gatagattggatgccgtagaagagctcgccaataagcagcttcttcaagattccattcgt
acaatcctatcaagaattaaagatattgaaagaataaaaactagagtatctttgggtaga
gcagcccccagagatctaatctctttgaaagagagtttaaaacaagccgataaattaagg
attaatttcgaatccaaaatcctaaaaaattcagcctcaaaaatttatggtatagagggc
ataattgaattaattgaaaatgcaataaatggggactatcctgtgggtgaaggagtaata
aaagaggggtataacgaagaattggatgagataaagcgtattgcttcaaatgcaaaattg
ttgattggaaagatggaagagagagaaagaaggaacacaggaataaaaaatttgaaaata
ggatacaatgatgttatgggttattacatagaagttagcaaatcaaatctctccaaagta
cctaagcattacagaagaaagcaaactttaaaaaattcggagagattcgttaccgacgag
cttaaagaattagagtacaaaattttaagtgcaaaggataggatttacgaaattgaaaac
aaaatttacagggatattctaaagaagcttggagagatgatagatgtaatagagagaact
gctaagagtatagccataattgatgtcatttcctcccttgcaagagttgcacttgagatg
aactacacaaggcctgaagtggatgaaagtatggacatagaaatcagaaatggtaggcac
ccggtagtagaattgtacacggattttgttcccaacgatacccatattaactcagatgct
aggtttataatccttacaggaccaaatatggcaggcaagagtacatatatgagacaagtg
gccttgatagtgatattagctcaaatgggctcatttgtaccggcagattatgccaaaata
ggaattgttgatcgcatatatacccgtgtaggtgctagcgatgatattacccgaggaaga
tcaacatttatgatggaaatggttgaacttgcaaacatcctcaatacagccacagagaga
tccctaatacttcttgatgagattgggagaggaacaagcacctacgatggtttagccatc
gcttggagcataacggagcatattcataattccataagagctagaactatttttgccact
cattatcaccatcttatagacctggagaatgttttagacaatgtgagaaactatcatatt
gctgtaaaagaaactcaagatggtttaatttttgtaaggaaagttatgcccggtgggatg
agcaagagctatggaattgaagttgcaaagcttgcaggagttccagaaaaggttgttaaa
agggcaaaggaaatattgaatctgatagaagaggaaaaagtaatagaggttagaagagga
aagaagataattcaaacgatgctatttggggaggagaattgttctgatattctggatgaa
ataaaaagaatggacataatgaatctcactcccttggaggcacttaataaactaaatgag
ttaaaaagaaaaatcgagaataggtaa
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