Aciduliprofundum boonei: Aboo_1494
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Entry
Aboo_1494 CDS
T01180
Name
(GenBank) pseudouridylate synthase TruB domain protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
abi
Aciduliprofundum boonei
Brite
KEGG Orthology (KO) [BR:
abi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abi03016
]
Aboo_1494
Enzymes [BR:
abi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Aboo_1494
Transfer RNA biogenesis [BR:
abi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Aboo_1494
Prokaryotic type
Aboo_1494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
ADD09300
UniProt:
D3TB21
LinkDB
All DBs
Position
complement(1440867..1441727)
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AA seq
286 aa
AA seq
DB search
MLKRSVEDLLNFGVVIIDKPKGPTSHQVSAWVRDILHINKTGHAGTLDPKVTGVLPVGLG
RATKLINLLHLVPKEYVGVMRFHKDFDENKVREIMKEFEGEIYQVPPLRSAVARRLRKRK
VYSIEILDLLDRDVLFRAKVESGTYIRTLCNDIGEAMCIGAHMEDLRRTATGHFREEDAH
TLQDLLDAYIFWKENGEEKYIRDIIRPAEDIVSFLPKIIVKDSAVNALAHGAPLYKPGVT
EMDNVEKGNYVALYTSDGELISVSIVVLEDNIIAKPFRVVMEPKKF
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgttgaagcgcagcgttgaagatctactaaatttcggcgtggtcataatagacaagcca
aaaggtcccacaagtcatcaggtaagcgcgtgggttcgtgacatattgcatataaacaag
acaggtcatgctggaactcttgatccaaaggtaacaggagtgctaccagtgggtttagga
agagctactaagctcattaatcttcttcatcttgttccaaaggaatatgtgggagttatg
cgctttcataaagattttgatgaaaataaggtaagggagataatgaaggaatttgaagga
gaaatttatcaggttcctcctttgagatctgcagttgctaggagattaagaaagagaaaa
gtttactctattgagattttagatttattagatagggatgttctctttcgggctaaagtt
gaatctggcacatatataagaactctctgcaacgacataggggaggcaatgtgtataggt
gctcatatggaagatttacgcagaaccgccactggacattttagggaggaggatgcacat
actttgcaagatttgctagatgcttacatattttggaaagagaatggagaggaaaaatat
atacgggacataattagacctgctgaggatatagtttcatttcttcccaagataatagtg
aaggattctgcggtgaatgctttagctcatggtgctcctctatataagccaggagtaact
gagatggataatgtggagaaagggaactatgttgctctttatacttcggatggcgagctc
atatcagtttccattgtagttttggaagataatatcattgctaaaccttttagagttgtg
atggaaccaaagaaattctga
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