Akkermansia biwaensis: Abiwalacus_01180
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Entry
Abiwalacus_01180 CDS
T08790
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
abiw
Akkermansia biwaensis
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abiw03009
]
Abiwalacus_01180 (rimO)
Enzymes [BR:
abiw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Abiwalacus_01180 (rimO)
Ribosome biogenesis [BR:
abiw03009
]
Prokaryotic type
ribosomal protein modification factors
Abiwalacus_01180 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
RIM2a_ZnF
Motif
Other DBs
NCBI-ProteinID:
BDL42544
LinkDB
All DBs
Position
164462..165820
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AA seq
452 aa
AA seq
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MSLTVGLISLGCPKNLIDSEIMIGHLQKAGMTMTPDAELADVMVVNTCAFIDQAKQEAID
AILDVVRARESGTYPENQKLIVAGCLSQRFHKELPALLPEVDAFIGPDQITRLPEIIMEV
MNRTVRNKNFVEGKCKYVPDWETPRYRLTPPHTAYIKIAEGCNHGCAYCIIPMIRGRHRS
RSQEDVVREAEALVRAGVKEINLIAQDITYYGMDKWTDARPNRRSAVDSSRGESLASLIR
ALNAIEGEFWIRLLYTHPAHWSDELTAAIAESPKVARYVDIPLQHISDNMLNAMQRVTDG
DYIRNLLRGIRKAVPGIAIRTTFITGFPGETEDDHQELMEFIEEFRFERAGIFTFSREEG
TRAYNMPDQVHYRTKARRYNEATMLLTRIASEIGQKQIGQQIRVLVDAPGTARTEWDAPD
IDGTVSVPLTLPVGEFATVTVTDAAAYELTAK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcaccgttggactcatttccctgggttgtcccaagaatttgatcgattccgaa
atcatgatcggtcacctgcagaaggcgggcatgacgatgacgccggacgcggaactggcg
gacgtgatggtggtcaatacctgcgcgttcatcgaccaagccaagcaggaagccatagac
gccattctggatgtggtgcgcgccagggaaagcggaacctatccggaaaaccagaagctg
attgtggcgggatgcctgtcccagcgtttccacaaggaacttcccgccctgctgccggag
gtggacgccttcatcggcccggaccagatcacccgcctgccggagatcatcatggaagtg
atgaaccggaccgtgcggaacaagaatttcgtggaaggcaaatgcaagtacgttccggac
tgggaaacgccgcgctaccgcctgacacctccccacaccgcctacatcaagatagcggag
ggctgcaaccacggatgcgcctactgcatcattccgatgatccgcggacgccaccgcagc
cgctcccaggaggacgtggtgcgcgaggcggaagccctggtcagggccggcgtgaaggaa
atcaaccttattgcccaggatatcacctattacggcatggacaagtggacggacgcgcgc
ccgaaccgccgcagcgcggtggattcctcccgcggggaatccctggcctccctgatccgc
gccctgaatgcgattgaaggggaattctggatccgcctgctttacacccaccccgcccac
tggagcgacgaactgacagccgccatcgcggaaagcccgaaggtggcgcggtacgtggac
attccccttcagcatatttccgacaacatgctcaacgccatgcagcgcgtgacggacggg
gactacatccgcaaccttctcaggggcatccggaaggccgtgcccggcatcgccatccgc
acgacgttcatcaccggcttccccggagagacggaagacgaccatcaggaactgatggag
ttcatcgaggaattccgctttgaacgcgccggcattttcaccttttcacgggaagaggga
accagggcctacaacatgccagaccaagtccactaccgcacgaaggcgcgccgctacaat
gaggcgaccatgcttctcacgcgcattgcttcggagatcggccaaaagcagatcggccag
caaatccgggttttggtagatgctcccggcacggccagaacggagtgggacgccccggac
attgacgggaccgtttccgttcctctcacgctgcccgtgggcgaatttgcaacggtcacg
gtgacggatgccgcggcctatgagctgacggcgaaataa
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