Akkermansia biwaensis: Abiwalacus_01650
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Entry
Abiwalacus_01650 CDS
T08790
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
abiw
Akkermansia biwaensis
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abiw03009
]
Abiwalacus_01650
Enzymes [BR:
abiw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
Abiwalacus_01650
Ribosome biogenesis [BR:
abiw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Abiwalacus_01650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BDL42591
LinkDB
All DBs
Position
219065..219631
Genome browser
AA seq
188 aa
AA seq
DB search
MILAFNKPYGVLSQFTREAPHHRTLAEFGFPPGVYPVGRLDSDSEGLLLLSDEKKLVDRL
LNPRNRHPRTYWSQVEGRPSPRDLLPLERGGILIRDYRTLPCRARIIPGEPDVPPREPPV
RYRANIPTAWLELTLVEGKNRQVRRMTAAMGFPTLRLLRVRIGNLPLDGLEPGTWKELSP
SERQAVMP
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgattctggctttcaacaaaccctacggagtgctttcccaattcacacgggaggcgccc
caccacaggactctggctgaattcggatttccgccgggcgtctatcccgtaggccgcctg
gactcggattcggaagggctcctgctgctctccgatgaaaaaaagctggtggaccgcctg
ctgaatccgcggaacaggcatcccagaacgtactggagccaggtggagggcagaccttcc
ccgcgggacctgctcccgctggaacgcggcggcatcctcatccgggactaccgcaccctg
ccgtgccgcgcacgcatcattcccggagaaccggacgtcccgccgcgggaaccgcccgtc
cgctaccgggccaatattccgactgcatggctggagctcacgctggtggagggcaaaaac
cgccaggtgcggcgcatgaccgccgccatgggttttcctacgctcagactcctgcgtgtc
aggatagggaatttgccgctggacggcctggagccgggcacatggaaggagctgtcgccg
agtgaacggcaggccgtcatgccgtaa
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