Akkermansia biwaensis: Abiwalacus_01990
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Entry
Abiwalacus_01990 CDS
T08790
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
abiw
Akkermansia biwaensis
Pathway
abiw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Abiwalacus_01990 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abiw03400
]
Abiwalacus_01990 (uvrB)
DNA repair and recombination proteins [BR:
abiw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Abiwalacus_01990 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Abiwalacus_01990 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
DUF87
AAA_30
Kinesin
AAA_5
AAA_22
AAA_7
Microtub_bd
TrwB_AAD_bind
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
BDL42625
UniProt:
A0ABM7ZD75
LinkDB
All DBs
Position
complement(265136..267268)
Genome browser
AA seq
710 aa
AA seq
DB search
MSSFELNSSFKPSGDQEQAIGKLLKSLEAGNKHQALLGVTGSGKTFTMANLIARMNRPTL
VISHNKTLAAQLHSELKSFFPNNAVDYYVSYFDYYQPEAYIASTDTYIEKDSAINDELDR
LSLNAMNSLMTRRDVIVVASVSCIYGLSTPEDYRNLTLRIREGDIMDRDVFLRQLVERLF
ERQDFDFLRGTFRVRGEVVEVFPAYSEGEAIRVEFFGDEVERVSLIDSVSGRVRERLGSY
TFFPAKQYVAAPEKRAAALKAIRQELADRVTWFEKEGRLLEAQRLKLRTDYDLELIEELG
FCKGIENYSRHLSGRLPGSAPSTLLDFFPKDSLTLIDESHAAVPQIGGMYEGDRSRKNIL
VDHGFRLPSALDNRPLKFHEFMERQNQIVYASATPGPFELINCRADNKTYIPVKRAARSG
EKAPEGFKGILFSSPKEIRVSPSPSSQPVEQFDPTKRSTPLIVEQIIRPTGLVEPKITIR
PLKGQIDETIALCNERVSKHERVLVTTLTKKTAEDLTDYLRGVGLKVSYIHADVDAIERV
EILRALRAQKIDVLVGINLLREGLDLPEVSLVCILDADKEGFLRNETSLVQTAGRAARHV
HGECVLFADVMTDSIKRLIELTDYRRGIQEEYNREHGIVPQTVSRSEQGQLKLYSEEDEE
SFRVAENEAPYGLEDRVAKLEAEMKEAASHLEFERAALIRDEIRQLREGR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttttgaattgaattcctccttcaagccgtccggggaccaggagcaggctatc
ggcaagcttctcaagtctctggaggccggcaacaagcatcaggccctgctgggtgtgacg
gggagcggcaagacgtttacgatggcgaatctgatcgcccggatgaacaggcccacgctg
gtgatttcccacaataagacgctcgcggcccagcttcattcggaattgaagagttttttc
ccgaataacgcggtggattattacgtctcctacttcgattattaccagccggaggcgtat
atcgccagcacggatacttatattgagaaggattccgccattaacgacgagctggaccgc
ctgagtctgaacgcgatgaattccctgatgacccgcagggacgtgatcgtggtggcgtcc
gtctcctgcatttacggcttgtccactccggaggattaccgaaacctgaccctgcgcatc
cgggagggggatatcatggaccgggacgtgttcctgcgccagttggtggaacgcctgttc
gaacggcaggattttgatttcctccgcggcacgttccgtgtgcgcggcgaggtggtggag
gtttttcccgcctattccgagggggaggctatccgcgtggagtttttcggcgacgaggtg
gaacgggtttccctgatagattccgtgtccggccgcgtgcgtgaacggctggggagctat
acgtttttcccggccaagcagtatgtggccgctccggagaagcgggccgcggcgttgaag
gccatccgccaggagctggccgaccgcgttacctggtttgagaaggaggggcgcctgcta
gaggcgcagcggctgaagctgcgcacggattacgatttggaattgatcgaggagctgggg
ttctgcaaggggattgagaattattcccgccatttgtccggacgcctgccgggcagcgct
ccttccacgctgcttgatttctttcccaaggattccttgaccctgattgacgagagccac
gcggccgtgccccagataggcggcatgtacgagggagaccgcagccgcaagaatattctg
gtggatcacggtttccgcctgcccagcgccctggacaacaggccgttgaagttccatgag
ttcatggagaggcagaaccagatcgtgtatgcttccgccacgccaggaccgtttgagttg
atcaactgccgtgcggataacaagacttacattcccgtcaagcgcgccgcccgctccggg
gagaaggctccggaaggcttcaaggggattttgttttcctcccccaaggagatacgagtc
agtcccagcccttcctcccagcccgtggagcagtttgatcccaccaagcgctccacgccg
cttattgtggagcagattatccgtcccacggggctggtggagccgaagattaccatacgc
ccgctgaaggggcagattgacgagacgatcgccctgtgcaatgaacgcgtttccaagcat
gagcgcgttctggtgacgacgctgaccaagaagacggcggaggatttgacggattacctg
aggggcgtgggcctgaaggtttcctatattcatgcggatgtggacgccattgagcgtgtg
gaaatcctgcgcgccctgcgtgcccagaagatagacgtactggtgggcatcaacctgctc
cgggaaggcctggacctgccggaagtgtctctcgtctgcattctggatgcagacaaggaa
gggttcctgcgcaatgaaacgtccctggtgcagacggcgggccgcgcggcgcgccatgtg
catggggaatgcgtgctgtttgcggacgtgatgacggattccatcaagcgcctgattgaa
ctgaccgattaccgccggggaattcaggaagagtacaatcgcgaacacggtattgttccc
cagaccgtgagccggtcggaacagggccagttgaagctgtattcggaagaggatgaagag
tctttccgcgtggcggaaaacgaggctccttatggcctggaagaccgtgttgccaagttg
gaggcggagatgaaagaggccgcctcccatctggagttcgaacgcgcggccctgatccgg
gatgaaatacggcagttgagggaaggccgctga
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