Akkermansia biwaensis: Abiwalacus_03130
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Entry
Abiwalacus_03130 CDS
T08790
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
abiw
Akkermansia biwaensis
Pathway
abiw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Abiwalacus_03130 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abiw03400
]
Abiwalacus_03130 (uvrA)
DNA repair and recombination proteins [BR:
abiw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Abiwalacus_03130 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Abiwalacus_03130 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
nSTAND1
AAA_23
AAA_29
SMC_N
AAA_21
AAA_16
RsgA_GTPase
AAA_25
DnaJ_CXXCXGXG
AAA_33
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
BDL42739
LinkDB
All DBs
Position
397179..399680
Genome browser
AA seq
833 aa
AA seq
DB search
MNLPISIRGARQHNLQNLNLDLPSGKLIAFSGPSGSGKSSLAFDTLFAESRRRFLDCLSA
RARQGIEQPDKPDVDSITGLPPALSLEQSARHQHPRTLLGSITEILDYLRILYAAAGRPH
DPETGKELVRQTPDQIADALASLPEQTRLVLTAPAEALLAQDPAATLGDFQRQGFLRIYW
NGEVRDIEELGVPDAPAPDAALVIDRIIIRGESSSSRLADSLQTALRINPDEVRAVITRP
EEEPAVQAFHTRYRNPETGYLLPQLTPRHFSFNSPLGACPACHGTGLNKQENGPCPECRG
QRLSPLALAVTMHTPDHAYNLAELTALPLEDMVGETKRLEIPAALAPALNPVMEEINKRT
HFLNELGLSYLSLDRQANTLSGGELQRARLASQLGGGLSGVLYILDEPTTGLHPSDTDRL
LRALQTLRNLGNTVLAVEHDEQILRAADHLVDMGPGSGARGGHILAQGSLQDIMANAESP
TGTWFSGTRQMPAPPRRAAPSGQLVLTHANRHNLNNITLRLPLGTLTCISGPSGSGKSTL
VRDCLIPALKKDLSGKKGVPRLVQGSERLSRLVVIDQSPIGKSPRSTPATATGLLNILRP
LYAQLPLSKQRGYTAARFSTNVRGGRCERCLGTGMIEVDMNFLGNVTMPCDACQGQCYNR
ETLEVTWKGKSIAQALALTVDEAAEFFATLPKAAAILKSMKDVGLGYLNLDRRADTLSGG
ESQRIKIASELAKAPAWKLAEDDKCALFILDEPTGGLHFNEVELLLKALFRLRDAGHTVL
CVEHHRDLLNAADHLIDMGPGAGRHGGNIVAEGAPSAVAAIPEAPTSRWLNPA
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcccatttccatccgcggcgcccgccagcacaacctgcagaatctgaacctg
gacctgccttccggcaagctgatcgccttcagcggtccttccggctccggcaagtcctcc
ctggcgttcgacacgctttttgccgaatcccgcagacgctttctggactgcctgtccgcc
agggccagacagggaatcgaacagccggacaagccggacgtggacagtatcacgggactt
ccccccgctctttccctggagcagtccgcccggcaccagcatccccggaccctgctggga
agcatcacggaaatcctggattacctgcgcatcctgtacgcggcggccgggcgcccccac
gacccggagacgggaaaggaactggtccggcaaaccccggaccagattgcggacgccctg
gcctccctccccgaacaaacgcgcctggtactgacggcccccgcggaagccctgctggcc
caggaccccgccgccacgctgggcgacttccagagacagggctttctgcgcatctactgg
aacggggaagtgcgggatatcgaggaactgggggttccggacgctccggcgccggacgcg
gccctggtcattgaccgcatcattatccggggggaaagctcctcttcccgcctggcggac
tccctgcaaaccgcactccgcatcaatccggacgaagtaagggccgtcatcaccaggccg
gaagaggaacccgccgtccaggccttccacacccgctaccgcaatccggaaacgggatac
ctgcttccccagctcacgccgcgccatttttccttcaactcccctctgggcgcctgcccc
gcctgccacggcaccgggctcaacaaacaggaaaacggtccatgcccggaatgccgcgga
caaaggctctccccgctggctctggccgttaccatgcacacgccagaccacgcctacaat
ctggcggaactcacggcgctcccgctggaggacatggtcggagagaccaaacggctggaa
attcccgcagccctggcccccgccttgaatcccgtgatggaggaaatcaacaagcgcacc
cacttcctgaatgaattggggctgtcctacctttccctggaccgccaggcaaacacgctc
tccggaggagaattgcagcgcgcacggctggcttcccaattggggggcggcctctccggc
gtcctgtacatcctggacgaacccacgacggggctgcacccttccgacacggaccgcctg
ctgcgggcgctccaaacgctgcgcaacctgggcaatacggtgcttgccgtggagcacgac
gaacaaattctgcgcgcggcggaccacctggtggacatgggcccgggctccggagccaga
ggcggccatatcctggcgcagggttcccttcaggacatcatggcaaacgccgagagcccc
accgggacatggttttccggaacgcggcaaatgccagcaccaccacgcagggcagccccc
agcggccagctcgttttgacacatgcgaacaggcacaacctgaacaatatcactctgcgt
cttccgctgggcaccctcacctgcatttccgggccgtccgggtccggcaaatccaccctg
gtgcgggactgcctcattcccgcgcttaaaaaggatttaagcgggaaaaagggagtcccc
cgcctcgtacagggatcggaacgtctcagccgcctggtcgtcatcgaccagtctcccatc
ggcaaatccccgcgctccacgccggccaccgccacgggactgctcaatatattgcggccc
ctttacgcccaactgcccctctccaagcagcggggctacacggcggcgcgcttctccacc
aatgtccgcggcggccgctgcgaacggtgcctgggaaccggcatgatagaagtggacatg
aattttctgggcaacgtaacgatgccctgcgacgcctgccagggccaatgctacaaccgc
gaaacactggaagtaacatggaagggaaaatccatcgcccaggcgctggcccttaccgtg
gatgaagcggcggaattcttcgccacgctgcccaaggccgcagccattctgaaaagcatg
aaagacgtggggctgggctacctcaacctcgaccgccgggcggacaccctttccggcggg
gaatcccaacgcatcaaaatagcctcggagctcgccaaggcgccggcctggaaactggcg
gaagatgacaagtgcgccctgttcattctggacgaacccacgggggggctgcactttaat
gaagtggaacttctcctgaaggcccttttccggctgagggacgccggacacaccgtcctg
tgcgtggagcaccaccgggacctgttgaatgcggcggaccatctcatcgacatgggaccg
ggcgccggaaggcacggcggaaacatcgtcgcggaaggggcaccctccgccgtggcggcc
attccggaggcgcccacgtcccgctggctgaatcctgcttaa
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