Akkermansia biwaensis: Abiwalacus_06510
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Entry
Abiwalacus_06510 CDS
T08790
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
abiw
Akkermansia biwaensis
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abiw03016
]
Abiwalacus_06510
Enzymes [BR:
abiw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Abiwalacus_06510
Transfer RNA biogenesis [BR:
abiw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Abiwalacus_06510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
BDL43077
LinkDB
All DBs
Position
825320..826378
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AA seq
352 aa
AA seq
DB search
MISEKEELLEWRKRAAAQPKGRVVLDLEADSLHRYQEKICLIQYADETGSCLIDPLAIED
MSPFYNWLRDTEVWMHGADYDMCLFQRAWETLPAMIWDTQTAARLLGFRQFGLAALVEHF
HGVTLSKSSQKADWARRPLSPTMVTYALNDVNYMLDMADKLMTALREKGRVGWFEEICRH
SMERARERYLTGHPDPWRIQGSGKLNRKGLAALRELWAWRDSEAKSWDRPSFMVCSNADL
IQWSVALQEQRPVSPSPRFHAHRRNRFTDAVQKFYLLDEDDYPCRPHIQRRQHSEQFEAN
LARLCKIRDEKAEELDIEGSFLITRASLEAIAEDKEKGMATLLNWQKEALGL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgagaaagaggaactactggaatggcgcaaacgcgctgccgcacagccaaaa
gggcgggttgtcctggatctggaagccgacagcctgcaccgctatcaggaaaaaatctgc
ctgatccagtatgccgatgaaacgggctcctgcctgatcgaccccctcgctatcgaagac
atgagcccgttttacaactggttgcgggatacggaagtatggatgcacggcgccgattat
gacatgtgcctgttccagcgcgcctgggaaacgctgcccgccatgatctgggacacccag
acggcggcgcgcctgctgggattccgccagttcgggttggccgccctggtggaacatttc
cacggcgtcacgctgagcaagtcctcccagaaggcggattgggcccggcgccccctttcc
cccacgatggttacctacgccctgaatgacgtcaattacatgctggacatggcggacaag
ctgatgaccgccctccgggaaaaaggccgcgtgggctggtttgaggagatttgccgccat
tccatggaacgcgcgcgggaacgctacctgaccggtcatccggacccctggcgcatccag
ggcagcggcaagctgaacaggaaagggctggccgccctccgggaattgtgggcctggcgg
gattccgaagccaaaagctgggacaggccctccttcatggtctgttccaatgcggacctg
atccagtggagcgtggcccttcaggaacaaaggcccgtttccccctccccccgcttccac
gcccacaggcgcaaccggttcacggacgccgtgcagaaattctacctgctggatgaagac
gattatccgtgccgtccccacatccagcgccgccagcattccgagcagtttgaagccaac
ctggcccgcctctgcaagataagggatgaaaaggcggaagaactggacattgaaggctcc
ttcctgattacccgcgcctccctggaagccatcgccgaagacaaggaaaaaggcatggcc
acgctgctgaactggcagaaggaagccctcggcctctga
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