Akkermansia biwaensis: Abiwalacus_07660
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Entry
Abiwalacus_07660 CDS
T08790
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
abiw
Akkermansia biwaensis
Pathway
abiw00470
D-Amino acid metabolism
abiw00550
Peptidoglycan biosynthesis
abiw01100
Metabolic pathways
abiw01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Abiwalacus_07660 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Abiwalacus_07660 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Abiwalacus_07660 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
abiw01011
]
Abiwalacus_07660 (ddlB)
Enzymes [BR:
abiw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Abiwalacus_07660 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
abiw01011
]
Precursor biosynthesis
Amino acid ligase
Abiwalacus_07660 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
GARS_A
RimK
ATP-grasp
GSP_synth
Motif
Other DBs
NCBI-ProteinID:
BDL43192
LinkDB
All DBs
Position
964122..965069
Genome browser
AA seq
315 aa
AA seq
DB search
MSILKRDLSIALLLGGPGAEREVSLVSGSSVYDALVRAGFTNVTRVDLQGPDFRLPEGTE
LAYNIIHGTFGEDGALQSILEERGIPYTGAGSRSSAVCFDKAKSKKIFTAAGVPTPKAEI
LDCSNGIVMPSLPLPFVIKPPCEGSSVGVHIVHRQEDVLPAMEKAVTHGPEVLVEEFIQG
RELTVGILDGEALPVIHICPRSGFYDLSNKYPWMNMGGGTDYICPADLPEETAKKVQEAA
LQAYRAAGVEIYGRVDVLLRDGDEAPFVLEINTIPGMTPSSLLPKAAAAAGWSYEALCEK
IAELSLATPRKERSI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcctcaagcgcgacctcagcatcgccctgctcctcggcggaccgggagccgaa
cgggaagtatccctcgtctccggcagctccgtttacgacgccctggtccgggccggattc
accaacgtcacccgggtggacttgcaaggcccggacttccgtttgccggaaggcacggaa
ctggcctacaacatcattcacggcaccttcggggaggacggcgcgctccagtccattctg
gaagaacgcggcatcccgtacaccggcgcaggctcccgttccagcgccgtttgctttgac
aaggccaaatccaaaaaaatcttcacggctgccggagtccccaccccgaaagcggaaatc
ctggactgctccaacggcatcgtgatgccgtcccttccgctgcctttcgtcatcaaaccg
ccctgcgaagggtccagtgtgggcgtccacatcgtccaccggcaggaagacgtgctgccc
gccatggagaaagccgtcacccacggtccggaagtgctggtggaggaattcatccagggc
agggagcttaccgtgggcattctggacggagaagccctgcccgtcatccatatctgtccc
cgctccggcttctatgacctcagcaacaaatacccctggatgaacatgggcggcggcacg
gactacatctgcccggcggaccttccggaggaaaccgcaaaaaaagtgcaggaagcggcc
cttcaggcgtaccgcgccgctggcgtggaaatttacggccgcgtggacgtgctgctccgc
gacggggacgaggcccccttcgtgctggaaatcaacaccattcccggcatgaccccctcc
agcctgctcccgaaggccgcggcagccgccggctggtcctatgaagccctctgtgaaaaa
attgcggaattatcgctagccacccccaggaaagagcgtagtatttga
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