Akkermansia biwaensis: Abiwalacus_08870
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Entry
Abiwalacus_08870 CDS
T08790
Symbol
topB
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
abiw
Akkermansia biwaensis
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abiw03032
]
Abiwalacus_08870 (topB)
Enzymes [BR:
abiw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Abiwalacus_08870 (topB)
DNA replication proteins [BR:
abiw03032
]
Prokaryotic type
DNA Topoisomerases
Abiwalacus_08870 (topB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
RPA_interact_C
HypA
Motif
Other DBs
NCBI-ProteinID:
BDL43313
LinkDB
All DBs
Position
complement(1109132..1111705)
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AA seq
857 aa
AA seq
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MSKTLIIAEKPSVATDLARVLGKELGKFTRDKSGSFYQNDKAIITSAVGHLLEQKKPMTE
GGKSLPWKFDYLPVIPKSFELEPIKQSEDRLKKVLQLARSKDVTEIVNACDAGREGELIF
HNLVRYGKWTKPARRLWMQSMTDEAILNAWHSMRSEADMQPLTNAAVCRSESDWLIGLNS
TRALTILQSRGGFSVTPAGRVQTPTLAILTQRELEIQAFEPEPYSEVWADFGVQSGVYSG
RWIDRDWKKNDNPHSRAERIWDSALATVIRDRCRGKSGTVTEEKKPVTTIAPLLYDLTSL
QREAANRYGFSAKRTLQLAQECYEKHKVLTYPRTDSRYLPEDYLGKVYGIVGAVAEENAE
FAPFARDILDNKRVKPNRRVFDTKKVSDHFAIIPTGKIEKLSGDVQKLFEMVMARFLAVF
FPPAVFEDTRRTTLIDHRDGVTDAFLTTGRVLVEPGWQAVYGRKAGSSSKEELVSVQDGE
QAAVREIEIRNAMTKPPARYNEATLLAAMEGAGKLVHDEELAAAMSERGLGTPATRASII
EGLISQEYIARDGRDLLATRRGIELIALLERIGLKTLTSPSLTGEWEYKLKQMEQASLGR
ESFMDGIKKLTGEIVKRVHDFQEAQQQVELPEMDLDCPCCHAHGLKNTLDAVSCRSCKFS
IRKVISGREMADEELKTLIVDGKTGILQGFTSRFGKPFEAGLELNDKCRATLYFPAREED
ESAVNEEAVKAASVIVPGMGEHDVMETAKAWKLPTLTAGKENTPVSVARTILGREIPLDQ
VLKILSEGKSDLMKGFISQRTKRPFDAYLVFNAKLGKIGFEFPPREKKYPARKAAGSGKN
AKESKESKGKEGKPKAK
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaccttaattatagcagaaaagccgagcgtagccactgatttggcgagagtt
ctcggcaaagagcttggaaaattcacccgtgacaagtccggttccttttaccagaacgac
aaagccatcatcacttctgccgtaggccatctcttggagcagaagaagcccatgacggag
ggcggcaagtcgctcccctggaagttcgattatctgcccgtcattcccaaatcctttgaa
ctggaacccatcaagcagtccgaagatcggttgaaaaaggttcttcagcttgccaggagc
aaggacgtgacggaaatcgtcaacgcatgcgatgccggccgcgaaggggaattgattttc
cataatctggtacggtacggcaagtggacgaagcccgcgcgccggctctggatgcagtcc
atgacggacgaggccattttgaacgcctggcacagcatgcgcagcgaggcggacatgcag
ccgctgaccaacgccgccgtctgccgttccgagtccgactggctgataggcctgaacagc
acccgcgccctgaccattcttcaatcccgcggagggttcagcgtaacgcccgccggacgc
gtccaaacgccgacgctcgccatcctgacgcagcgcgaattggagatccaggcgtttgaa
ccggaaccctattccgaggtgtgggcggatttcggcgttcaatccggagtttattccggc
cgctggattgaccgtgactggaagaagaacgacaatccccattcccgtgcggagcgcatc
tgggattctgcgctggctaccgtcatccgcgaccgctgccggggcaagtccggcacggtg
acggaggaaaagaagcccgttacgacgattgcccccctgctgtacgatttgacttccctc
cagagggaggccgccaaccgctacggcttttccgccaaaaggacgctccagcttgcgcag
gaatgctatgaaaagcacaaggtgctgacttatccccgtacggattcccgctacctgccg
gaagattatctgggcaaggtgtacggcatcgtcggcgccgtggcggaggagaatgcggag
ttcgccccctttgccagagacattctggacaacaagcgggtaaagcccaacaggcgcgtg
tttgacaccaagaaggtgagcgaccacttcgccattattccgacgggcaagatcgaaaaa
ctgagtggcgacgtgcagaagctttttgaaatggtcatggcgcgtttcctggccgttttc
ttccctcccgccgtttttgaagataccaggagaaccactctcatcgaccaccgggacgga
gtcacggacgccttcctgaccacggggcgcgtgcttgtggaacccggctggcaggccgtg
tacggccgcaaggccggcagctcctccaaggaggaactggtgtccgtgcaggacggcgaa
caggcggccgtgcgcgaaatcgagatacgcaacgccatgaccaagcccccggcccgctat
aatgaagccaccttgctggccgccatggaaggagccggaaaactggtgcacgacgaagag
ctggccgccgccatgagtgaacgcggcctgggtacgcccgccacccgcgcctccatcatt
gaaggcctgatttcccaggaatacattgcgcgcgacggccgggacctgctggcgacgcgg
cgcggcattgaattgatcgccctgctggagcgcatcggcctgaaaactctgacatccccc
agcctgaccggagaatgggaatacaagctcaagcagatggagcaggcgtccctgggacgg
gaatccttcatggacggcatcaagaagctgaccggggagattgtgaagcgcgtccatgac
ttccaggaagcccagcagcaggtggaattgccggaaatggacctggattgcccgtgctgc
catgcgcacggcctgaagaacacgctggacgccgtttcctgccgctcctgcaagttcagc
atccgcaaggtgatttccggccgcgagatggcggatgaagagttgaagaccctgattgtg
gacggcaagacggggattctgcaaggatttacatcccgcttcggcaagccctttgaggcc
gggctggaactcaacgacaagtgccgcgccaccttgtacttccccgccagggaggaggac
gagtccgcagtcaatgaagaagccgtgaaggccgccagcgtcatcgtccccggcatggga
gaacacgacgtgatggaaaccgccaaggcatggaaactgcccaccctgacggcagggaag
gaaaatactcccgtttccgtggcccgtaccatcctggggcgtgagattcctctggaccag
gtgttgaagattctttccgagggcaaatcagatttgatgaagggattcatttcccagcgc
accaagcgtccgtttgacgcctatctcgtgttcaatgccaagctgggcaagatcggcttt
gaattcccaccccgggaaaagaagtaccctgccaggaaagcggcaggctccggcaagaat
gccaaagagagcaaagaaagcaaggggaaggaaggcaagccgaaggccaaataa
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