Akkermansia biwaensis: Abiwalacus_10540
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Entry
Abiwalacus_10540 CDS
T08790
Name
(GenBank) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
abiw
Akkermansia biwaensis
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abiw03016
]
Abiwalacus_10540
Enzymes [BR:
abiw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Abiwalacus_10540
Transfer RNA biogenesis [BR:
abiw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Abiwalacus_10540
Prokaryotic type
Abiwalacus_10540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BDL43480
UniProt:
A0ABM7ZFC1
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All DBs
Position
1320767..1321501
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AA seq
244 aa
AA seq
DB search
MNNSDSIQTPSGVLLIDKEQDMTSHDVVAIARRSLGIKKIGHCGTLDPMATGLLMLVVGK
ATKLQDKLMCEHKEYAGTLTLGVETSSQDAMGEVVAEYSVEGVTDEAVRDAFDRFDGQFE
QIPPMVSAIKKDGVPLYKLARKGQEVVREPRPVEVFGHRITRMAIPEVDFTVQCSKGFYV
RSYAYDIGKALGCGAHLSALRRTQSGRFTLDRAITVETLKTAPREELFRAMLSLEELAAI
LIAK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaataattccgattccatacaaactccgtcaggcgtgctgctgatcgacaaggagcag
gacatgacttcccacgatgtcgtggcgattgcgcgccggtccctggggatcaagaagatc
gggcactgcggcacgctggaccccatggctacggggctgttgatgttggtggtgggaaag
gccaccaagcttcaggacaaactgatgtgcgaacacaaggaatacgctggtacgctgacg
ctgggcgtggagacttcctcccaggatgccatgggggaagtggtggcggagtattccgtg
gaaggtgttaccgatgaggcggtgagggatgcctttgaccggtttgacgggcagtttgag
cagattcctcccatggtgtccgctatcaagaaggacggcgtgccgctgtacaagctggcg
cgcaaggggcaggaggttgtccgtgaaccgcggcccgtagaggttttcggccaccggatt
acccgcatggccattccggaagtggatttcaccgttcagtgctccaagggtttttacgtg
cgttcctatgcctatgatataggaaaggcgctgggctgcggggcccatttgagcgccttg
cggcgcacacagtccggccgctttacgctggaccgggccattacggtggaaaccctgaaa
accgcgcccagggaggagttgttccgggcaatgctttccctggaggaactggcggccatc
ctgattgccaagtaa
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integrated database retrieval system
