Akkermansia biwaensis: Abiwalacus_13210
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Entry
Abiwalacus_13210 CDS
T08790
Symbol
kdsD
Name
(GenBank) arabinose 5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
abiw
Akkermansia biwaensis
Pathway
abiw00541
Biosynthesis of various nucleotide sugars
abiw01100
Metabolic pathways
abiw01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Abiwalacus_13210 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
abiw01005
]
Abiwalacus_13210 (kdsD)
Enzymes [BR:
abiw01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
Abiwalacus_13210 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
abiw01005
]
Lipid A
Abiwalacus_13210 (kdsD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
DUF2726
Motif
Other DBs
NCBI-ProteinID:
BDL43747
UniProt:
A0ABM7ZG58
LinkDB
All DBs
Position
complement(1669140..1670111)
Genome browser
AA seq
323 aa
AA seq
DB search
MNHLTRARSVFEMEIEELRGVLSRLDENFNKAVDLMSRALDRGNKIVIAGVGKSGNVGAK
IVATLNSTGTPTVMLDSLNALHGDLGIVQDGDVCIAMSFSGETTELLTLLPFIKRFELPV
ISMTGNIHSSLAKYSDVVLDTGVSREACPLNLAPTSSTTAMLVMGDALAMALVEARHFTA
KDFAKRHPGGSLGRALLTRVSDIMRQGDEMAILPETATVNDCLKAMTTAHTGACILLTAD
GKLAGIFTHGDFVRAYGANPLIGQQPVGGLMTRNPIYVMEDDLAAEAVKAVSNRHIDDLV
VLNKDMAPVGIIDLQDLARMKLV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatttaacacgcgccagatccgtttttgaaatggagattgaagaactgcgtggc
gtcctgtcccggctggatgaaaacttcaacaaggccgtggacctcatgtcccgggccctg
gaccgcggcaacaagatcgtcatcgccggcgtcggaaaatccggcaacgtcggggccaaa
atcgtagccaccctgaactccacgggcacgcccaccgtcatgctggactccctgaacgcc
ctgcacggggacctgggcatcgtccaggacggagacgtctgcatcgccatgtccttctcc
ggggaaaccacggaactcctgaccctccttcccttcatcaagcgctttgaacttcccgtc
atctccatgacggggaacatccattcttctctggccaaatactcggacgtcgtcctggac
acgggagtttcccgcgaggcctgcccgctgaacctggcccccacgtccagcaccacggcc
atgctcgtcatgggggacgccctcgccatggccctggtggaagcgcgccacttcaccgca
aaagactttgccaaacgccacccgggcggctccctgggccgcgccctccttaccagggtg
agcgacatcatgcgccagggggatgaaatggccattctgccggaaacggccaccgtcaac
gactgcctgaaagcaatgaccaccgcccacacgggagcttgcatcctgctcacggcggac
ggcaaactggccggcatcttcacccacggcgacttcgtcagggcgtacggcgccaaccct
ctcatcggccagcagcccgtcggcggcctcatgacccgcaaccccatctacgtgatggaa
gatgacctggcggcggaagccgtgaaagccgtcagcaaccgccacattgacgacctggtg
gtactcaacaaggacatggcgcccgtcggcatcatcgacctccaggacctggcacggatg
aagctggtctaa
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