Akkermansia biwaensis: Abiwalacus_15210
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Entry
Abiwalacus_15210 CDS
T08790
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
abiw
Akkermansia biwaensis
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abiw03400
]
Abiwalacus_15210
DNA repair and recombination proteins [BR:
abiw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Abiwalacus_15210
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
BDL43947
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All DBs
Position
1899750..1900184
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AA seq
144 aa
AA seq
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MSRTLEMTHKIMSAVKSKNTRPELALRHALWARGLRYRVNVKSLKGKPDVVFTRAKIVVF
CDGDFWHGHNWAIRGLSSLEEELDKYTQFWRDKILGNIQRDKEQTVHLENEGWNVIRIWE
SDIKKDVAKCADIIEEAYQKAISK
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggactttagaaatgacccataagattatgtctgcggtgaagtccaaaaatacg
agaccagaactcgcgcttcgccacgctctttgggcacgcggtttgcgttatcgagtaaac
gtaaaatctctcaaaggcaaaccggatgtggtttttacgagggcgaaaattgtggttttt
tgtgacggtgacttctggcacggacataactgggcaatccgaggcttatcgtcgttagag
gaagaactggataaatatacgcagttttggcgggataaaattctcggtaatatccaacga
gataaggagcagaccgttcatttggaaaatgaggggtggaacgtgataagaatttgggag
agcgatataaaaaaagacgtcgcaaagtgtgcggatattattgaagaggcgtatcaaaag
gccatatcaaagtaa
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