Akkermansia biwaensis: Abiwalacus_16500
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Entry
Abiwalacus_16500 CDS
T08790
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
abiw
Akkermansia biwaensis
Pathway
abiw03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Abiwalacus_16500 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
abiw03011
]
Abiwalacus_16500 (rpsA)
Ribosome [BR:
abiw03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Abiwalacus_16500 (rpsA)
Bacteria
Abiwalacus_16500 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
PCB_OB
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
BDL44076
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Position
2049107..2050795
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AA seq
562 aa
AA seq
DB search
MSTTELAELIDSKFRELREGSIVTGTIQEIRPQVVLVDIGYKSEGAISISEFEDEEIEVG
DQIEVLLERLENDEGIVVLSKEKAAHKQNWDKIVGVYRDGGLVKGKVKSVVKGGLMVNVG
VEAFLPGSQVDIIPPRDLNEYVGKVYEFKIVKVNDDRKNIVLSRREVIEAERADQRQRFL
ETVKEGDKVEGLVKNITDFGAFVDLRGMDGLLHITDMSWGRVNHPSEMLHIGQSLEVVIL
EVDRDKERVSLGLKQMTDNPWADIERKYPINSQVKGRVTKLLPYGAFVELEKGVEGLVHV
SELSWVKRITRPSDVLKLDQEIEAVVLSISVKEQKISLGVRQLEDNPWADIESRFPIGTV
IKGQVRNLTPYGAFVGLEEGIDGMIHVSDMSWTRKINHPSEVLKKGDEVEAIVLEIKKED
QRVSLGIKQLESDPWESINDRFKVGDMVSGQVAKIASFGAFVNLDGDIDGLIHISQLSED
HVERVKDVIKVGDEITARVIKVDSIERRIGLSIKAVNYDTEQLRRETASFEALRPSSDMV
GLEHAFNLATRENEEWSPSEEK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaactgaactggcggagctgattgacagcaagttccgcgaattacgagaaggt
tccatcgttaccggaaccatccaggaaatccgtccccaagtcgttttggtggacatcggc
tacaagtccgaaggcgctatttccatttccgagtttgaagacgaggagatcgaagtaggg
gaccagatcgaggtccttcttgaacgcctcgaaaacgacgaaggtatcgtcgtcctttcc
aaggaaaaagccgcccataagcagaattgggacaagatcgtgggcgtgtaccgcgacggc
ggcctggtcaagggcaaagtgaagagcgtcgtcaagggcggcctgatggtcaacgttggc
gtggaagccttcctgcccggttcccaggtggatatcattcccccgcgcgacctgaacgag
tatgtcggcaaggtttacgagttcaagatcgtcaaggtgaacgacgaccgcaagaatatc
gttctttcccgccgcgaagtgatcgaagccgaacgcgccgaccagcgccagcgcttcctt
gaaaccgtcaaggaaggcgacaaggtggaaggcctcgtgaagaatattacggacttcggc
gctttcgtggacctccgcggcatggacggcctgctccacattacggacatgagctggggc
cgcgtgaaccatccgagcgaaatgctccacatcggccagtccctggaagtcgtgattctg
gaagtggaccgcgacaaggaacgcgtttccctgggcctgaagcagatgacggacaatccc
tgggcggacatcgaacgcaagtacccgatcaattcccaggtcaagggccgcgtgacgaag
ctcctgccttacggcgccttcgtggagctggaaaaaggcgtggaaggcctcgttcacgtt
tccgaactgtcctgggtcaagagaatcacccgtccgagcgacgtgctgaaactggaccag
gagatcgaagccgttgtgctttccatttccgtcaaggaacagaagatttccctcggcgtc
cgccagctggaagacaatccctgggcggatatcgaatcccgcttcccgatcggtaccgtt
atcaagggccaggtccgcaaccttactccctacggcgcctttgtgggcctggaagaaggc
atcgacggcatgatccacgtgtccgacatgagctggacccgcaagatcaaccacccctcc
gaagtgctcaagaagggcgacgaagtggaagccatcgttctggaaatcaagaaggaagac
cagcgtgtctcccttggcatcaagcagcttgagtccgatccgtgggaatccatcaacgac
cgcttcaaggtgggcgacatggtgagcggccaggtggccaagatcgccagcttcggcgcc
tttgtgaatctggacggcgacatcgacggcctgatccacatttcccagctgagcgaagac
catgtggaacgcgtgaaggacgtgatcaaggtgggtgatgaaatcaccgcccgcgtgatc
aaggtggacagcatcgaacgccgtatcggcctttccatcaaggccgtcaattacgacacc
gaacagctccgccgtgaaaccgcttcctttgaagccctccgcccgagcagcgacatggtc
ggcctggaacacgccttcaatctggctacccgtgaaaacgaagaatggagcccctctgaa
gagaagtaa
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