Akkermansia biwaensis: Abiwalacus_19200
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Entry
Abiwalacus_19200 CDS
T08790
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
abiw
Akkermansia biwaensis
Pathway
abiw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Abiwalacus_19200 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abiw03400
]
Abiwalacus_19200 (priA)
Enzymes [BR:
abiw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Abiwalacus_19200 (priA)
DNA repair and recombination proteins [BR:
abiw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Abiwalacus_19200 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
ATPase_2
AAA_19
AAA_30
AAA_16
nSTAND_NTPase5
zf-CHY
AAA_7
SLFN-g3_helicase
TrwB_AAD_bind
DUF8106
PIF1
Motif
Other DBs
NCBI-ProteinID:
BDL44346
UniProt:
A0ABM7ZI24
LinkDB
All DBs
Position
complement(2389918..2392134)
Genome browser
AA seq
738 aa
AA seq
DB search
MLAARILVDGQSDLVLDYGIPPEAGNVRPGCRVQIPLRNRTATGTVLTLSEPDPAWQDRL
KPILKLIDPEPLISPVMMDLAAWAADYYSVALDQMIRCLLPETVRQENTSEKIRKMVHLE
KQPTREELDALYRKAPRQAQMLDYFSTTEQKAAPLSEFGPGALNIARGLAGKGFISLREE
SVHRDPMTGEQFAPSLSMKLNPQQEKALEAVTAMCRAETKRPVLLQGVTGSGKTEVYLQA
VSQIVQEGKSALIMVPEISLTPQTVQRFKSRFADMPSSVAVLHSLLSDGERFDEWHAIRS
GKARIVVGPRSAVFAPLQNLGLIIVDEEHDASYKQESSPRYHGRDLAVLRAHLEGCAVVL
GSATPSLESIHNAQTGKYALARLTERADGQQLPLIRILDMKTEGKNKAGPNVLSERLRMS
IDRRLDRGEQVILLLNRRGFARSIQCPDCGHVITCMHCSLPLTYHRTEDRLMCHLCGFKS
LVPRTCPECKSASILLQGYGTQKVEEILRRTFPAARITRVDADVARRKNAVRDILNQFRA
RKIDILLGTQMIAKGLDFPGVTLVGVLNADLGLYIPDPRAGERTFQLLTQVAGRAGRGDL
SGEVIIQTFTPQSPSLQYARHHDTDGYAAQELEVRRAFDLPPFTHIAVLTIRSQHENMAE
FATRTLGARLRGMLPPDTTMTDPMPAPIPRAHGQFRYQITVKGPSARAISRALRKLVQEA
GLGDDLTAVIDVDAMSFM
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgctggcggcgcgcatcctggttgacggtcaaagcgacctggtgctggattacggcatt
cctccggaagccggaaacgtccggcccggatgccgcgtgcagattcccctgcgcaacaga
acggctacgggaaccgttcttaccctttccgagcccgacccggcgtggcaggacaggctc
aagccgattctcaagctgattgacccggaaccgctgatttccccagtgatgatggatctg
gccgcatgggccgccgactattattccgtcgccctggaccagatgatccgctgcctgctg
ccggaaaccgtccggcaggaaaacacgtcggagaaaatccgcaaaatggtgcatctggaa
aaacagccaacccgggaagaactggacgcactgtaccgcaaggctccccgccaggctcaa
atgctggattatttttcaacgacggaacagaaggcggctcctctgtcggaattcggcccc
ggggccctgaacatcgcccgcggcctggcaggcaaaggcttcatttccctgcgggaggaa
tccgtccaccgggaccctatgaccggggagcaattcgcccccagcctgtccatgaagctg
aatccccagcaggaaaaagccctggaagctgtcacggccatgtgccgggcggaaaccaaa
aggccggtactccttcagggcgttaccggttccggcaagacggaagtttatctccaggcg
gtctcccaaatcgtgcaggaggggaaatccgccctgatcatggtgccggaaatctccctg
acgccccagaccgtccagcgtttcaaatcccgctttgcggacatgccttcttccgtggcc
gtacttcacagcctgctctccgacggagagcgctttgacgaatggcatgctatccggtcc
ggaaaggcgcgtatcgtcgtcgggccccgctccgccgtcttcgctcctctccagaatctg
ggcctgattattgtggatgaagagcacgacgcctcctataagcaggaaagctcaccccgc
taccacggccgcgacctggcggtcctgcgcgcccatctggaaggctgtgccgtcgtcctg
gggtccgccacgccgtccctggaaagcatccacaacgcccagaccggaaaatacgccctg
gccaggctgacggaacgtgcggacggccagcaactgccgctgatccgcattctggacatg
aaaacggagggtaaaaacaaagccggccccaatgtgctttcggaacgcctcagaatgtcc
atcgaccgccgcctggacaggggggagcaagtgatcctgctgctcaatcgccgcggattc
gcacgttccatccagtgcccggactgcgggcacgtcatcacgtgcatgcactgttccctt
cccctcacctaccaccgcacggaagaccgcctgatgtgccatttgtgcggtttcaagtcc
ctggtgcccagaacctgcccggaatgcaaatccgccagcatccttctccagggctacggt
acccagaaagtggaggaaatcctgcgccgcacctttcccgcggcgcgcatcacgcgcgtg
gacgcagacgtggcgcggaggaaaaacgccgtcagagacatcctgaaccagttccgggcc
cgtaaaatagacattctgttgggaacccagatgatcgccaaaggcctggattttccgggc
gtcacactggtgggtgtgctcaatgcggacctgggcctttacattcccgacccgcgggca
ggcgaacgcaccttccagctcctgacgcaggtggcgggccgcgcaggccgcggagacctg
tccggggaagtcattatccagacgttcaccccgcagtccccctccctgcaatatgcacgg
catcatgatacggacggctacgcggctcaggaactggaagtgcgccgtgccttcgatctt
ccgcccttcacccacatcgccgtgctgacgatccgttcccagcatgaaaacatggcggaa
ttcgccacccggaccctgggagccaggctccgcggaatgctgccgccggacacgacgatg
acggacccaatgcccgcgcccattccccgtgcccacggccagttcaggtaccagatcacg
gtcaagggaccttccgcgcgcgccatctcacgcgcactcagaaagctggtgcaggaagcc
gggctgggagacgacctgacggccgtcattgacgtggacgccatgtcattcatgtaa
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