Akkermansia biwaensis: Abiwalacus_20670
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Entry
Abiwalacus_20670 CDS
T08790
Symbol
trpB
Name
(GenBank) tryptophan synthase beta chain
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
abiw
Akkermansia biwaensis
Pathway
abiw00260
Glycine, serine and threonine metabolism
abiw00400
Phenylalanine, tyrosine and tryptophan biosynthesis
abiw01100
Metabolic pathways
abiw01110
Biosynthesis of secondary metabolites
abiw01230
Biosynthesis of amino acids
Module
abiw_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Abiwalacus_20670 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
Abiwalacus_20670 (trpB)
Enzymes [BR:
abiw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
Abiwalacus_20670 (trpB)
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Gene cluster
GFIT
Motif
Pfam:
PALP
DFP
Motif
Other DBs
NCBI-ProteinID:
BDL44493
UniProt:
A0ABN6QMH5
LinkDB
All DBs
Position
complement(2568044..2569267)
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AA seq
407 aa
AA seq
DB search
MDLHTYLRNFPDARGRFGEYGGVYLPDELVPAFEEITEAYQTIAHSAQFINELRRIRKQF
QGRPTPVYHCERLSRHLGTSQIYLKREDLNHTGAHKLNHCMGEGLLAKYMGKKRIIAETG
AGQHGVALATAAAFFGLECEIHMGAVDIAKQAPNVTRMKILGAKVVPVTHGLQSLKEAVD
SAFDSYLNSYKDSIYCIGSVVGPHPFPQMVRDFQMCIGVEAREQFLEMTGLLPDAVCACV
GGGSNSMGMFTAFLGDPLDIYGVEPLGKGPRLGDHSASITYGTKGVLHGFESIMLQDEDG
NPGPVHSVASGLDYPSVGPEHAYLHDIGRVNYVTATDEEAVDAFFKLSRYEGIIPALESS
HAIAYAMKWAQENPGRAILVNCSGRGDKDVDYVVENYGYGENHQFPA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggatctccatacttatctgcgcaattttccggatgcccggggtcgcttcggcgaatac
ggcggcgtatatctaccggacgaactcgtccccgcctttgaagaaatcacggaggcttac
cagaccatcgcccattccgcccagtttatcaacgaactgcgccgcatccgcaagcagttc
caggggcgtcccacccccgtttaccactgcgaacgcctgtcccgccacctgggcacctcc
cagatttacctgaagcgggaagatctgaaccacacgggcgcgcacaagctcaaccattgc
atgggggaaggccttctcgccaaatacatgggcaagaaacgcatcattgcggaaaccggc
gcgggccagcacggcgtggcgctggcgacagcggccgccttcttcggcctggaatgcgag
attcatatgggggcggtggacatcgccaagcaggcgcccaacgtcacgcgcatgaaaatt
ctgggcgccaaggtcgtccccgtcacccacgggctccagagcctgaaggaagccgtggac
tccgcctttgattcctacctgaacagctacaaggactccatttactgcatcgggtccgtg
gtaggcccccaccccttcccccaaatggtgcgcgacttccagatgtgcatcggcgtggaa
gcccgggaacaattcctggaaatgaccggactgcttccggacgccgtgtgcgcctgtgtg
ggcggcggcagcaattccatgggcatgttcactgccttcctgggcgacccgctggacatt
tacggcgtggagccgctcggcaagggccccaggctcggagaccattccgcctccatcacc
tatggaaccaagggcgtcctgcacggtttcgagagcatcatgctccaggatgaagacggc
aaccccggcccggtccattccgtggccagcgggctggactacccctccgtggggccggaa
cacgcctacctgcacgacatcggccgcgtgaattacgtaaccgctacggacgaggaagcc
gtggacgccttcttcaagctttcccgttatgagggaatcatcccggccctggaaagctcc
catgccattgcgtatgccatgaaatgggctcaggaaaacccaggaagagccattctggtc
aactgttccggccgcggagacaaggacgtggactacgtcgtggaaaactacggctacgga
gaaaaccaccagttccccgcctga
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