Akkermansia biwaensis: Abiwalacus_20970
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Entry
Abiwalacus_20970 CDS
T08790
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
abiw
Akkermansia biwaensis
Pathway
abiw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Abiwalacus_20970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abiw03019
]
Abiwalacus_20970
03400 DNA repair and recombination proteins [BR:
abiw03400
]
Abiwalacus_20970
Enzymes [BR:
abiw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Abiwalacus_20970
Messenger RNA biogenesis [BR:
abiw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Abiwalacus_20970
DNA repair and recombination proteins [BR:
abiw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Abiwalacus_20970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RQC
RecQ_Zn_bind
Cas3-like_C_2
ResIII
RPA
Motif
Other DBs
NCBI-ProteinID:
BDL44523
LinkDB
All DBs
Position
2605818..2607968
Genome browser
AA seq
716 aa
AA seq
DB search
MSGFKLIRSPMEALKEHFGFSGLREGQDRVVAAIMEGRNVLVVMPTGGGKSLCYQLPALC
REGVCLVVSPLIALMKDQVDALVAKGIPATMINSSLSFPEQKERLSGMKEGSYKLVYVAP
ERFGHEGFMRALAEVDVNMVAVDEAHCLSQWGHDFRPDYLKLGRAIEAMGRPQVAALTAT
ATPRVRDDILEHLHLEDPVTIVRGFARENLHFRITACDTHKEKYKRLYDLVKRNKTGIIY
CSTRKKVEQVYEALSDLGLSVTAYHAGMTDAQREEAQNAFMNRQADIVIATNAFGMGIDR
ADVRFVAHFEIPGSVEAFYQEAGRAGRDGRDAYCELLFNHADLRTQEFFIEGVNPGVPLI
VELYELLRKHCSAESHEVSWTLEEMAERLKCRNAMQVGAALSVLMRNGAISRHDVPGQRV
KLTRVADPSMSGLKIPLDERAIREKEVRDREKLKAMTEFAYSAGCRQQWILNYFGEEGAV
PCGRCDQCMALGVEEGQVMGEEETRVVRQALSGIARASVRQADGSWQGRWGRTKVIHMLK
GSKSQDLLKTSLVRLSTYGILSSWSEDDIRQLFRAMQMAGLTKMSGEADRPLVTLSPKGN
EVMMGRQEVSMIWPFARRSAAPDRRGQTRVRSTGDFAALGEFDEDLFMKLKELRNELARE
AGIPAYAVFHNSTLEAMARLKPTTRRGAMNIHGIGERKAARYLDDFLEIIAEHCGV
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggttcaagctgatcagatctcccatggaggcattgaaggaacacttcgggttt
tccgggctgagggaggggcaggaccgtgtggtggctgccatcatggaggggcgcaacgtt
ctggtggtgatgcctaccgggggcggcaagtccctgtgctaccagcttcccgccctgtgc
cgggagggcgtatgcctggtggtcagcccgctgattgccctgatgaaggaccaggtggat
gcccttgtggccaaaggcattcccgcgaccatgatcaacagctccctgagtttcccggaa
cagaaggaacgcctgtccggcatgaaggaaggaagctacaagctggtgtatgtggctccg
gaacgtttcggccatgagggattcatgcgggccctggcggaggtggacgtgaacatggtg
gccgtggacgaggcccattgcctgagccagtgggggcacgatttccgtccggattatttg
aaacttggccgcgcgattgaagccatggggcggccgcaggtcgcggccctgaccgccacg
gctacgccccgcgtgcgggacgatattctggagcatctgcatctggaagaccctgtgacc
atcgtgcgcggttttgcccgggagaacctgcatttccggattaccgcctgtgatacgcac
aaggagaagtacaagagactgtacgatcttgtaaaacgcaacaaaacgggtatcatttac
tgttccacccgcaagaaggtggaacaggtgtatgaggcgctttccgatctgggcctgagc
gttacagcctaccatgccggcatgacggacgcccagcgggaggaggcgcagaatgccttt
atgaaccgtcaggcggacatcgtcattgccacgaatgccttcggcatggggattgaccgt
gcggatgtcaggtttgtggcccattttgagattcccggcagtgtggaagccttttaccag
gaagccgggcgggccggacgcgacggccgggacgcttattgtgagcttttattcaaccat
gcggacttgaggacgcaggagtttttcattgagggagtcaatcccggcgtgcctcttatt
gtggagctgtatgagttgctgcggaagcattgcagcgcggagtctcacgaggtgtcctgg
actctggaggaaatggcggaacgcctcaagtgccggaatgccatgcaggtgggagcggcg
ctgtccgtcctgatgcgcaacggagccatcagccgccatgatgttccggggcagcgggtg
aagctgaccagggtggcggacccgtccatgagcggcctgaagatacctctggacgaacgg
gccatccgggagaaggaggtgcgcgaccgcgagaagctgaaggccatgacggagtttgcc
tattcggccggatgccgccagcagtggattctgaattactttggagaggaaggggccgtt
ccctgcggccgctgtgaccagtgcatggccctgggagtggaggaaggccaggtgatgggg
gaggaggaaaccagagtcgtgcggcaggcgttgagcggcattgcacgcgcttccgtccgg
caggcggacggttcctggcagggacgctggggcaggacgaaagtcatccacatgctcaag
gggtccaagtcacaggatttgttgaagacgtctctggtccggctgagtacgtacggcatt
ctttcatcttggagtgaggacgatatacgccagttgttccgcgccatgcaaatggcgggc
ctcactaaaatgagcggggaagcggaccgccccctggttaccctgagcccgaaggggaac
gaggtgatgatgggcaggcaggaggtttccatgatctggcctttcgcccgcaggagcgct
gccccggaccgcagggggcagaccagggtccgctccacgggggattttgccgccctgggg
gagtttgatgaagatttatttatgaaattgaaagaactgcggaatgaactggcccgggaa
gccggaatacccgcttacgcggttttccacaattccacgctggaagccatggcccggctg
aaacctactacgcgccggggggccatgaacatacacggcatcggggagcggaaggccgca
cgttatctggatgattttctggagataatcgccgaacattgcggcgtgtag
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integrated database retrieval system
