Akkermansia biwaensis: Abiwalacus_25120
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Entry
Abiwalacus_25120 CDS
T08790
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
abiw
Akkermansia biwaensis
Pathway
abiw02024
Quorum sensing
abiw03060
Protein export
abiw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Abiwalacus_25120 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Abiwalacus_25120 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Abiwalacus_25120 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
abiw02044
]
Abiwalacus_25120 (ffh)
Enzymes [BR:
abiw01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
Abiwalacus_25120 (ffh)
Secretion system [BR:
abiw02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Abiwalacus_25120 (ffh)
Eukaryotic Sec-SRP protein
Abiwalacus_25120 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_16
ArsA_ATPase
AAA_28
ResIII
Zeta_toxin
APS_kinase
Fer4_NifH
AAA_33
AAA_31
Thymidylate_kin
AAA_17
AAA_24
nSTAND3
AAA_30
ParA
Arf
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BDL44938
LinkDB
All DBs
Position
complement(3123946..3125433)
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AA seq
495 aa
AA seq
DB search
MQAAPVDGGGELWHSLAHRTIMFSLLADKLDNTFRRLRGLGKISEKNIADAMRDIRLALL
EADVEFGVARDFIARVKERAMGQEVLKSIKPGEQIVKIFRDEIASLLGGDAVGLDLTDPA
RIMVVGLNGAGKTTTSAKLALRLKNEGRRPLLVACDLVRPAAVDQLATLAEQIQVPVYKP
APGSRDVVAVAREALEWAKTQNGTVMIFDTAGRQEVDEALIDELRHLHSFLSPRETLLVV
DAATGQQAVGVAQTFDRAVNVTGIVLTKLDGDARGGAALSMRSVTGKPIKFSGEGEKLDQ
FGPFVPGRMADRILGMGDIVGLVEHAAARIDEEQAAKSMSRMMSGKFDFNDFLDQMKMMQ
NLGPLEGLLGLLPGFGKIKKQLPDGALDPKRMKHMEAIVLSMTARERSNPNLLNPSRRRR
IAAGSGRSLMEVNKLIKNFSEMRKMMSGKGKMGAMMKQMGAMKGGKMPSLPGMGGGLGAL
KGLGGGLGGLFGGRK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccgcgcctgttgacggaggcggggaattgtggcacagtctggcacaccgcacg
attatgttttcacttttagcagataaactggacaacacgttccggaggctgaggggcctg
ggaaagatttctgaaaagaacattgcggacgccatgcgcgacatccggctggccctgctg
gaagccgacgtggagttcggcgtggccagggacttcattgcccgcgtcaaggagcgcgcc
atggggcaggaagtgctcaaatccatcaagcccggagaacagatcgtcaaaatcttccgt
gatgaaatcgcctccctgctgggcggcgatgccgtaggcctggacctgacggaccctgcc
agaatcatggtggtgggcctgaacggcgccgggaagaccaccaccagcgcgaagctggcc
ctgcgcctgaaaaacgaagggcgccgccccctgctggtggcctgcgacctggtacgcccc
gccgccgttgaccagctggctaccctggcggaacagatccaggtgcccgtgtacaagccc
gcgcccggcagccgggacgtggtggccgtggcccgggaagccctggaatgggccaaaacc
cagaacggaaccgtcatgatctttgacacggcgggccgccaggaagtggacgaggcgctg
atcgacgaactgcgccatctgcactccttcctctctccccgtgaaaccctgctggtggtg
gatgccgccacggggcagcaggccgtcggcgtggcccagacctttgaccgggccgtcaac
gtgacgggtatcgtcctgaccaagctggacggcgacgctcgcggcggcgcggccctctcc
atgcgttccgtgacgggcaagcccatcaaattctccggggaaggggaaaaactggaccag
ttcggccccttcgtccccggccgcatggcggaccgtattctgggcatgggggacatcgtg
ggcctggtggagcatgccgccgcccgcattgacgaggaacaggcggccaaatccatgagc
cgcatgatgtccggcaaattcgacttcaacgactttctggaccagatgaaaatgatgcag
aacctgggtcccctggaagggctgctgggacttctgcccggcttcggaaaaatcaaaaag
cagctcccggacggcgcgcttgatcccaaaaggatgaagcacatggaagccatcgtcctt
tccatgacggccagggagcgcagcaaccccaacctgctgaacccgtcccgccgccggcgc
attgccgccggctccggtcgttccctgatggaggtgaacaagctcatcaagaacttttcg
gaaatgcgcaagatgatgtccggcaagggcaaaatgggcgccatgatgaagcagatgggg
gccatgaaaggcggcaagatgcccagccttcccggaatgggaggaggcctgggcgccttg
aaaggcctcggcggaggtctggggggcctgttcggcggccgcaaataa
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