Entry |
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Name |
(GenBank) excinuclease ABC subunit A
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KO |
K03701 | excinuclease ABC subunit A |
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Organism |
abk Acinetobacter baumannii AbH12O-A2
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:abk00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LX00_17820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:abk03400]
LX00_17820
DNA repair and recombination proteins [BR:abk03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LX00_17820
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LX00_17820
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
3680914..3683748
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AA seq |
944 aa
MSQSHIRIRGARTHNLKNVSLDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLSQMEKPEVDSIEGLSPAIAIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTP
YCPEHDLPMVAQTVSEMVDAVKNLEEGTALMLLAPVVRERKGEYSNLFEQLQGQGFVRAR
VDGEIIDIDTPPELDKKKKHTIEVVVDRFKVRDDLGNRIAESFETALRLGGDIAVLSWMN
GEHPDRVFSAKHSCPECDRAVAELEPRLFSFNNPFGACPVCDGLGTRSHFSPEKLIPNPE
LAISEGAIRGWDRQRPYYYSMLQKVADHFGFQLDTPWNQLDKDTQKKFLQGTGKEKIDLS
YIDERGRKHTRVQPFEGILPHLERRYRETESNYVRDDLAQYLSNAACDACGGSRLNEISR
HVRVKDKTIADITRMSIGDAESYYQGINLEGAKGEIADKIFKEIRERLHFLVSVGLNYLS
LARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLQTLIRLRDLGN
TVLVVEHDEDAIRAADHIIDIGPGAGVHGGVVIAEGTYDELAKHADSLTGQYLSGKLKIE
VPKQRTQPPKPEEKIKLSGAAGHNLKNVDLTIPLGIMTCVTGVSGSGKSTLINRTLLPLA
ATQLNGATTLTAEKFDSIDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAQT
PEAKARGYSAGRFSFNVKGGRCEACEGDGMIKVAMHFLPDMYVPCDACHGKRYNRETLEV
GYKGKNISDVLEMTVEDAAEFFSAIPVIHRRLETLTQVGLGYIRLGQAATTLSGGEAQRV
KLARELAKRDTGKTLYILDEPTTGLHFHDIAKLLDILHELRSKGNTIVVIEHNLDVIKTA
DWVVDLGPEGGSGGGMIIAEGTPEQVAEVEISHTGRFLKPMLKQ |
NT seq |
2835 nt +upstreamnt +downstreamnt
atgagccaaagtcatatccgtattcgaggcgcacgcacccataacttaaaaaatgtgtca
ctcgatattccacgcgacaaatttgtggtaattacggggctatcaggttcaggaaaatct
tctcttgcctttgataccttgtatgccgaaggacagcgccgttacgtcgaatcactttcg
gcctatgcccgtcagtttttatcgcaaatggaaaaacctgaagttgactcgattgaaggt
ttatcaccagccattgcgattgagcaaaagtctactagccataacccacgttcaacggtt
ggtacgattaccgaaatttatgactatttgcgtctgctttatgcacgtgtcggtacgcct
tattgccctgaacacgacttacctatggttgcgcaaactgtttctgaaatggtcgatgcg
gtaaaaaaccttgaggaaggtacagcacttatgttgcttgcccctgttgttcgtgagcgt
aaaggtgaatacagcaacttgttcgaacaactacaaggtcaaggtttcgttcgtgcccgt
gttgatggtgaaatcattgatattgatacaccaccggaactcgacaaaaagaaaaaacat
accattgaagtcgttgttgaccgctttaaagtacgtgatgatttaggcaaccgtattgct
gaatcatttgaaaccgcactgcgtttaggtggtgatattgctgttttatcatggatgaat
ggcgaacaccctgatcgcgtcttttctgcaaagcactcatgccctgaatgtgatcgcgca
gtcgcagagcttgagccacgtttattttcatttaacaacccgtttggtgcgtgccctgtc
tgtgatggcttaggtacacgtagccattttagccctgaaaagctcattcctaaccctgag
cttgcaattagtgaaggtgctattcgtggttgggatcgtcaacgtccttattactattca
atgctgcaaaaagttgccgaccatttcggttttcaacttgatacaccttggaatcagtta
gataaagacacgcaaaagaaattcttacaaggtactggcaaagaaaaaatcgatttaagt
tatatcgatgaacgcggccgtaaacatactcgcgtacaaccgtttgagggaatcttgcct
caccttgagcgccgttatcgtgaaactgaaagtaactatgtacgtgatgatttagcacaa
tatctctctaatgcagcgtgtgatgcatgtggtggttcacgtctcaatgaaatttcacgt
catgttcgtgtaaaagataaaaccattgctgacattacccgcatgtcgattggagatgcc
gaaagttactatcaaggtataaaccttgaaggtgccaaaggtgaaattgcagataaaatc
tttaaagagattcgtgagcgtttacatttcttggtgagtgttggcctgaactatttaagt
ctggctcgttctgccgaaacactatcgggtggtgaagcccagcgtatccgtctagcttcg
caaattggtgcaggtttgatgggtgtcatgtacgtccttgatgaaccatcaattggtctc
catcaacgtgataatgaccgtttattacaaacgctaattcgcttacgtgatttgggcaat
acggtattagtcgttgaacatgatgaagatgcaatccgtgcagctgaccatattattgat
atcggccctggtgctggcgtgcatggtggtgttgtcattgctgaaggtacgtatgatgag
ctggctaaacatgccgactcgctcacaggtcaatatctttcaggcaaactcaaaattgaa
gtgccaaaacagcgaactcaaccacctaaacctgaagaaaaaattaaactttcaggtgca
gcgggtcataacttaaaaaatgtcgatttaaccatcccacttggcattatgacttgtgtc
acgggtgtttcaggttcaggtaaatcaacactgattaaccgtacgttactcccactggct
gcaacacagctcaacggtgcaacgaccttaaccgctgaaaagtttgattcaattgatggt
ctacaacatctggataaagtcgttgatattgaccaaagcccaattggccgtactccacgt
tctaaccctgcaacgtatacagggttatttacgccaattcgtgagttatttgctcaaaca
ccagaagcgaaagctcgtggttatagtgcgggtcgtttctcgtttaacgtaaaaggcgga
cgttgcgaagcgtgtgaaggcgacggtatgattaaagtcgcaatgcacttcttaccagac
atgtatgtaccttgcgatgcttgtcatggcaaacgttataaccgtgaaacacttgaagtc
ggttataaaggcaaaaacatttctgatgttttagaaatgacggttgaagatgctgctgag
ttttttagtgctattccagttattcaccgtcgtttagaaaccttaactcaggtaggtcta
ggctatattcgtttaggtcaggcggctactactttatctggtggtgaagcacagcgtgtc
aaactggctcgtgagttagcaaaacgtgatacgggtaaaacgctttatatcttggatgaa
ccaacaacaggtctgcatttccatgatattgccaagttactcgatattttgcatgagcta
cgcagcaagggtaataccattgtggtgattgaacataacctcgatgtcattaaaacagca
gactgggttgtcgacttaggtccagaaggtggttcgggcggtggtatgatcattgccgaa
ggtacacctgaacaagtagccgaggtcgagatttcccatactggtcgcttcttgaaaccg
atgttgaaacaataa |