Aliarcobacter butzleri 7h1h: A7H1H_1187
Help
Entry
A7H1H_1187 CDS
T02755
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
abl
Aliarcobacter butzleri 7h1h
Pathway
abl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A7H1H_1187 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abl03019
]
A7H1H_1187 (pnp)
03016 Transfer RNA biogenesis [BR:
abl03016
]
A7H1H_1187 (pnp)
Enzymes [BR:
abl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A7H1H_1187 (pnp)
Messenger RNA biogenesis [BR:
abl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A7H1H_1187 (pnp)
Transfer RNA biogenesis [BR:
abl03016
]
Prokaryotic type
tRNA degradation factors
A7H1H_1187 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
MIC19_MIC25
KH_2
Motif
Other DBs
NCBI-ProteinID:
AGR77487
LinkDB
All DBs
Position
1143820..1145997
Genome browser
AA seq
725 aa
AA seq
DB search
MSKVCEFELNGKQEIFEFEKVAKQSNGAVLAKIGNAVVLATVVSEFDNPVSEDFTPLTVQ
YIEKTYAAAKLPGGFIKREGKPSDFETLTSRVIDRSLRPLFPKGYVYPTTITVMVLSADK
NVDLQTLSLNAANAALYTSNLPIKKSVCGVRVGKIENTLVINPTNEQLENSTLDLYVAGS
KDELLMIEMKTISSSELIEIDIEAFTKIHNTNEMDEDALVEAIAFAQNALKEANLTYEKA
FEEVSKEKIEVELVKFTIEESVINYVRDNFSNDIKEAIKKLAKSERATQLKDVAKMISKN
EYCISNEIEFNTIYEAVSVVKREIVRAMIVNERVRADGRGLKDVRPISIETNILPSTHSS
CLFTRGETQALVIGTIAGPKDGQMYEVLTDKSTSMENFMVHYNFPGFSVGEAKPMFGVGR
RELGHGNLAKKALEATIDKDYNETVRLVSEILESNGSSSMATVCGGSLALKAAGIPISDL
VAGVAMGMVVENDKYAILTDIMGLEDHDGDMDFKVAGTSKGITALQMDIKLGGIELSVLK
EALLQAKEGRTHILSLMKDAEKDIVPSNALPLIEQFAIDPSKIMVVIGKAGATIKEIIEK
FTVSIDLDKENGTVKVSGGNKQNILDACEHIKTISNNASSKKDASKNIDFEKLYSEDEVV
IGKVERLADFGAFILLPKGGEGLLHISKISKDRVKNVADVLSIGQELEVKVLKVKKDRIE
LSSAN
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagtttgtgaatttgaattaaatggaaaacaagagatttttgaatttgaaaaa
gtagctaaacaatcaaatggtgctgttctagcaaaaatagggaatgctgttgttttagca
actgttgtgagtgaatttgataatcctgttagtgaagatttcacacctttaacagttcaa
tatattgaaaaaacttatgctgcagcaaaattaccaggaggatttataaaaagagaaggg
aaacctagtgattttgaaacattaacatcaagagtaattgatagaagtttaagaccactt
ttccctaaaggttatgtttatcctacaacaattacagttatggttttaagtgctgataaa
aatgttgatttacaaactttatctttaaatgcagcaaatgcagctttatatacttcaaat
ttaccaattaaaaaatcagtttgtggagttagagttgggaaaatcgaaaatactcttgta
attaatccaacaaatgaacaattagaaaattcaactttagatttatatgtagctggttct
aaagatgaattattgatgattgagatgaaaactatctcttcaagtgaacttatagagatt
gatattgaagcatttactaaaattcataatacaaatgagatggatgaagatgctttagtt
gaagcaattgcatttgcacaaaatgctttaaaagaggctaatttaacttatgaaaaagct
tttgaagaagtttcaaaagagaaaattgaagtagaattagttaaatttactattgaagaa
tctgtaataaattatgtaagagacaatttttctaacgatattaaagaagctattaaaaaa
ttagcaaaaagtgaaagagcgactcaattaaaagatgttgcaaaaatgatttcaaaaaat
gaatattgtatctcaaatgaaatagagtttaatactatttatgaagctgttagtgttgta
aaaagagaaattgtaagagctatgattgtaaatgaaagagtaagagcagatggaagaggt
ttaaaagatgtaagaccaatttcaatagaaacaaatattttaccttctacacattcttct
tgcctttttacaagaggtgaaacacaagcgcttgttattggaacaattgctggacctaaa
gatggacaaatgtacgaagttttaacagacaaatcaacttcaatggaaaactttatggtt
cattataattttccaggatttagtgttggtgaagcaaaacctatgtttggggtaggaaga
cgagaattaggacatggaaatttagctaaaaaagctttagaagcaactattgataaagat
tataatgaaactgtaagattagtttctgaaatacttgaatcaaatggttcttcatctatg
gcaactgtttgtggtggttctttagcattaaaagcagctggaattccaatttctgattta
gttgctggtgttgcaatgggaatggttgttgaaaatgataaatatgctattttaactgac
attatgggattagaggatcatgatggtgatatggattttaaagttgcaggaacttctaaa
ggaattacagctttacaaatggatataaaattaggtggaattgaattatctgttttaaaa
gaggctttacttcaagcaaaagagggaagaactcatattttatctttaatgaaagatgct
gaaaaagacatcgttccaagcaatgctttacctctaatcgaacaatttgctattgaccca
agtaaaataatggtagttataggaaaagcaggagctacaataaaagagattatagagaaa
tttacagtatctattgatttagataaagaaaatggaacagtaaaagtaagtggaggaaat
aaacaaaatattcttgatgcttgtgagcatattaaaactatttcaaataatgcttcttca
aaaaaagatgcttcaaaaaatatagactttgaaaaactttattcagaagatgaagttgta
atcggtaaagtagaaagattagcagattttggagcatttattcttttaccaaaaggtggt
gaagggcttttacatatttcaaaaatatcaaaagatagagtaaaaaatgttgctgatgtt
ttaagtatcgggcaagaattagaagtaaaagtactaaaagtaaaaaaagatagaatagaa
ttatcttcagcaaattaa
DBGET
integrated database retrieval system
