Acinetobacter baumannii SDF: ABSDF1361
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Entry
ABSDF1361 CDS
T00660
Symbol
rnhA-dnaQ
Name
(GenBank) bifunctional protein [Includes: ribonuclease HI; DNA polymerase III, epsilon subunit, 3-5 exonucleolytic proofreading function]
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
abm
Acinetobacter baumannii SDF
Pathway
abm03030
DNA replication
abm03430
Mismatch repair
abm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABSDF1361 (rnhA-dnaQ)
03430 Mismatch repair
ABSDF1361 (rnhA-dnaQ)
03440 Homologous recombination
ABSDF1361 (rnhA-dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abm03032
]
ABSDF1361 (rnhA-dnaQ)
03400 DNA repair and recombination proteins [BR:
abm03400
]
ABSDF1361 (rnhA-dnaQ)
Enzymes [BR:
abm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABSDF1361 (rnhA-dnaQ)
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
ABSDF1361 (rnhA-dnaQ)
DNA replication proteins [BR:
abm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABSDF1361 (rnhA-dnaQ)
RNase H
ABSDF1361 (rnhA-dnaQ)
DNA repair and recombination proteins [BR:
abm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABSDF1361 (rnhA-dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
DNA_pol_A_exo1
Rv2179c-like
RVT_3
LPD1
Motif
Other DBs
NCBI-ProteinID:
CAP00707
UniProt:
B0VKV7
LinkDB
All DBs
Position
complement(1258371..1259750)
Genome browser
AA seq
459 aa
AA seq
DB search
MSQTITLYVDGACRGNPGLGGWGAYVITEQGEHKLFGGEPDTTNNRMELTAAIEGISFCP
PDAQLIVWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWQKLDAVCAGRNIEWNWIKGHA
GHAGNEMADQLANLGADKTAQELKQPQSATVSQDIKKPEQDWLLDDPFGFDLVETTEDET
ITLEQTQEVEMIVVDEEMNVVEAVEQEEQQQNTNIHPQIVMTEAKLKLQGPRQLILDTET
TGFYFQDGDRIIEVGAIEMINRKLTGSSIHIYINPEKPVGDSVQVHGITDEFLVDKPKYA
EIADTLFEYLKGAEIIAHNATFDMNFLDMEFKRVGLPALSEVCEVTDTLALAKNKHPGQK
NSLDALVRRYEIPARDRTFHGALLDAEILSDVYLAMTGGQVSFDMDALSQSESDQQKTTK
ARVQIELPVIYPSDEELNIHETWVKEFEKKHGEPCLFAK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaacaatcacactgtatgttgatggtgcatgtcgtggcaatccgggtttaggc
ggttggggtgcatatgtcattaccgaacagggtgaacataaattatttggcggtgaaccc
gacacaacaaataaccgtatggaacttactgcggctattgaaggaatctctttttgccca
cctgatgctcaattaattgtctggacagactcaaattatgtgaagcaaggtattacagaa
tggattcatggttggaaaaagaaaaactggaaagatgttaaaaatcctgacctatggcaa
aaactcgatgccgtttgtgcgggtagaaatattgaatggaactggattaaaggccatgca
ggacatgcaggtaatgaaatggctgaccaacttgcgaatttaggtgcagacaaaactgct
caagaacttaagcaaccacagtcagccactgtatcgcaagatataaaaaagcctgaacaa
gactggttactagacgacccattcggattcgatctggttgaaacaaccgaagatgaaact
atcactttagagcagacacaagaagttgagatgattgttgtggatgaagaaatgaatgta
gttgaggctgtagaacaagaagaacaacagcaaaataccaatattcatccacaaattgtg
atgactgaagccaagcttaaattacaaggcccaagacaactcatactcgatacggaaaca
actggtttctatttccaagatggtgaccgcattattgaagtcggtgcgatcgaaatgatt
aaccgtaagcttacgggtagttcgattcacatttatattaatcctgaaaaaccagtgggt
gactctgttcaagtccacggtattacagatgagtttttggtcgacaaaccaaaatatgca
gaaattgcagataccttatttgaatacctaaaaggcgcagaaattattgcccataacgca
accttcgatatgaacttcttagatatggagtttaaacgtgttgggttacctgctctttca
gaagtttgtgaagttaccgatactttagctttagcgaaaaataagcatcctgggcagaaa
aactcacttgatgccttagttagacgttatgaaattccagcgcgtgaccgtactttccac
ggcgcattactcgatgctgaaattctttctgatgtttacttggcaatgaccggtggtcaa
gtttcctttgatatggatgccctatcgcaaagtgaaagtgaccagcaaaaaacgaccaaa
gctagagttcaaattgaattacctgttatttacccttcagatgaagagctaaacatacat
gagacttgggtcaaagaatttgagaaaaaacatggagaaccttgcctttttgcaaaataa
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