Acinetobacter baumannii SDF: ABSDF1625
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Entry
ABSDF1625 CDS
T00660
Symbol
hfq
Name
(GenBank) host factor I for bacteriophage Q beta replication, a growth-related protein
KO
K03666
host factor-I protein
Organism
abm
Acinetobacter baumannii SDF
Pathway
abm02024
Quorum sensing
abm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABSDF1625 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABSDF1625 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abm03019
]
ABSDF1625 (hfq)
03036 Chromosome and associated proteins [BR:
abm03036
]
ABSDF1625 (hfq)
Messenger RNA biogenesis [BR:
abm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ABSDF1625 (hfq)
Chromosome and associated proteins [BR:
abm03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ABSDF1625 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
CAP00965
UniProt:
B0VM65
LinkDB
All DBs
Position
1531817..1532326
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AA seq
169 aa
AA seq
DB search
MSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYKHAIS
TVVPARNPRPAGAQGAGFPAQGGSQGGFGGQGAGFGGAQGAGFGGQGGFGGQGGFGGQGG
FGGQGGFGGQGGFGGQGGFGGHQGGFGGHQGGFDNDSKFEDGQDDENNR
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaggtcaaactttacaagatccgttcttaaattctctccgtaaagaacgcatc
ccagtttctattttccttgttaacggtattaaattacaaggtcatattgaatcttttgac
caatatgttgttttattaaaaaatactgtaagtcaaatggtttacaaacacgcaatttct
acagttgttccagctcgtaacccacgtccagcaggtgcacaaggtgcaggtttcccagct
cagggtggtagtcaaggtggcttcggtggtcaaggcgctggctttggtggtgctcaaggt
gctggcttcggtggccaaggcggctttggtggtcaaggtggcttcggtggtcaaggtggc
ttcggtggtcaaggtggcttcggtggtcaaggcggcttcggtggtcaaggcggcttcggc
ggacatcaaggcggcttcggcggacatcaaggcggttttgataacgattctaaatttgaa
gatggtcaagacgacgaaaacaatcgttaa
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