Acinetobacter baumannii AB0057: AB57_3493
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Entry
AB57_3493 CDS
T00793
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
abn
Acinetobacter baumannii AB0057
Pathway
abn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB57_3493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abn03019
]
AB57_3493
03016 Transfer RNA biogenesis [BR:
abn03016
]
AB57_3493
Enzymes [BR:
abn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AB57_3493
Messenger RNA biogenesis [BR:
abn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AB57_3493
Transfer RNA biogenesis [BR:
abn03016
]
Prokaryotic type
tRNA degradation factors
AB57_3493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
ACJ42860
UniProt:
A0A7U4DI11
LinkDB
All DBs
Position
3612794..3615211
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AA seq
805 aa
AA seq
DB search
MTKNWVDPEAKAEAERYDNPIPSRTLILDTLEQLQTPQSHAELVDHFHIQDQKSIEALSH
RLSAMVRDGQLMKDGFKFQLVADQPTYEATVYINSKGLGTAHIDGQDDLLLPERELRLVF
NGDRVRVRQTSVDRKGKPWGFITEVIQHRVKQLIGKLSVHDGEYFIQPNNPNQHQPIPLE
KELVEHAKANVGDMLRVAIDTYPTREEFATAHIIQSMADKADTEIIIPQTILEFGLPYEF
PDEVIKEAESFKEPAEQDREGRVDLRDLALVTIDGEDARDFDDAVYAEKRPGGGYRVVVA
IADVSHYVRLDSALNEEAEERGTSVYFPHFVLPMLPEALSNGLCSLNPHVDRLCMVCDLK
LSRTGRVTGYEFYPAVMHSKARLTYTQVGQYFEGATDAIPKDRDIHKSLNTLFQLYQILK
NLRVDRHAMEFETIETYMTFDELGGIKEILPRTRNDAHKLIEECMLLANVAAAEYALEHD
IPMLYRVHEAPEFSRIQKVKDFVKLLGLPFPDQPTQADYQKVIEATKDRIDAPSIHAVLL
RSMMQAYYGAKNAGHYGLAYEAYTHFTSPIRRYPDLLLHRAIKAHLKQKPYPLSGAALDD
AGEHFSQTERRADEASRSVTTWLKCHYMQQHLGDEFIGIVSAVTEFGLFVTLKDLYVDGM
IHISQLGDDFFIYDQASQNLIGQNRGQVFGLGDEVKIQVAGVNLEERKIDFQLIKQVTHA
GRVVRSRAPRTTKTSTQATEEVFGKPSVSTDGEKPVRKKKEKGKPSSYSKKSGKKTSTKA
EAKPEKVKKKAKPKKKKSNAKSKAD
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaactgggttgaccccgaagcaaaagccgaagctgaacgttatgacaatcct
attccaagccgtactcttattttagatacgttggaacaattgcaaacaccgcaatctcat
gcagaacttgttgaccattttcatattcaagatcagaaaagtattgaagccttaagtcat
cgcttaagtgctatggttcgtgatggccaacttatgaaggatggttttaagtttcagttg
gtggcagaccaacctacctatgaagcaactgtctatattaatagtaaaggtttgggtaca
gcacatattgatggtcaagatgatttgttattacctgagcgtgagttacgtttagtcttt
aatggtgatcgggtccgtgttcggcagacatcggtagatcgcaaaggtaaaccgtggggt
ttcattaccgaagttatacagcatcgtgtaaaacagttaattggtaaattgtcggtacat
gacggcgaatattttattcagcccaacaatccaaatcagcatcaacctatccctctagaa
aaagaattggttgaacatgctaaagcaaatgtcggcgatatgcttcgtgttgctatagac
acttacccaacccgggaagaatttgcaacggcacatattattcagtctatggcagataaa
gccgatactgaaattattatcccgcagaccattttagagtttggtttgccttacgaattt
ccagatgaagttataaaagaagctgaaagtttcaaagaacctgctgaacaagatcgcgaa
ggtcgagttgatttaagagacttggcacttgtcacaatcgatggtgaagatgcgcgagat
ttcgatgatgcagtatatgcggaaaaacgtcctggtggtggttaccgagttgtcgttgca
attgccgatgtgagccattatgtacgtttagattcggcactaaatgaagaagctgaagag
cgcggcacttcggtttatttcccacattttgttttaccaatgctaccagaagcattatca
aatggattgtgctcacttaacccacacgtagatcgtctatgcatggtctgtgacctaaaa
ctttctcgtacgggtcgtgttacaggttatgaattttatccggcagtcatgcattcaaaa
gcacgtttgacctatacacaagtaggacaatattttgaaggtgcaactgatgcaattcca
aaagatcgtgatattcataaatcgctaaatacacttttccagctttaccagattttgaaa
aacttacgtgttgatcgtcatgcaatggagtttgaaaccattgaaacttatatgaccttt
gacgagttaggtggaattaaagaaattttacctcgtacacgtaatgatgctcataagctt
attgaagagtgtatgttgcttgccaatgtagcagcagcagaatatgccttagaacatgat
attccgatgttgtatcgtgtacatgaggcacctgaattctcacgtattcaaaaagtaaaa
gattttgtaaaactattgggtttacctttccctgaccaaccaactcaggcagattatcaa
aaagttattgaggcaactaaagaccgtattgatgcgccaagcattcacgccgtgttatta
cgctcaatgatgcaagcttactatggtgccaaaaatgcaggtcactatggtctagcttat
gaagcttatacacatttcacttcaccaattcgccgctacccggacttattgttacatcgt
gcaattaaagctcatctaaaacaaaagccttacccactttccggtgcagctttagatgat
gcaggtgaacatttctctcaaacagaacgccgtgccgatgaagcatcccgcagcgtaacg
acttggttgaaatgtcactatatgcaacaacatttaggtgatgagttcattggtattgtg
agtgcggtaactgaatttggcctatttgttactcttaaagatctttatgttgatggcatg
attcacattagccaacttggcgatgatttctttatttacgatcaagctagtcaaaacctc
attggacaaaatcgtggtcaagtcttcggtttaggcgatgaagttaaaattcaagttgct
ggtgtaaatctagaagagcgtaaaatcgatttccaactcattaaacaagttactcatgct
ggacgtgtagttcgtagtcgcgctccacgcacaaccaaaacaagcacccaagcaacagaa
gaagtttttggtaaaccgtctgtatcaactgatggtgaaaaacctgtccgtaaaaagaag
gaaaaaggcaaaccaagctcatatagtaaaaagtctggtaagaaaacctctacaaaagca
gaggctaaaccagaaaaagtaaagaaaaaagcgaaacctaaaaagaaaaagtcaaacgcc
aagtctaaggctgactaa
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