Alcanivorax borkumensis: ABO_0328
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Entry
ABO_0328 CDS
T00380
Symbol
nusA
Name
(GenBank) transcription elongation factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
abo
Alcanivorax borkumensis
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abo03021
]
ABO_0328 (nusA)
03009 Ribosome biogenesis [BR:
abo03009
]
ABO_0328 (nusA)
Transcription machinery [BR:
abo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ABO_0328 (nusA)
Ribosome biogenesis [BR:
abo03009
]
Prokaryotic type
rRNA transcription factors
ABO_0328 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
RNA_pol_A_CTD
KH_NusA_C
vWA_Ro60
Motif
Other DBs
NCBI-ProteinID:
CAL15776
UniProt:
Q0VSS2
LinkDB
All DBs
Position
358688..360265
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AA seq
525 aa
AA seq
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MLGCSPASIEYALKNFSLCKGLAMNKEILLVAETVSNEKGVSRDVIFEAIELALAAATKK
RFKQEDVEIRVDIDRESGNARSFRVWHVVPDEELFEFGKQLTLDEAHEQDTSLQIGDIWE
EEVESEAFGRIAAQTAKQVIVQKVREAERRQIVEEYRDRIGDLVSGTVKKASRDSIVLDL
GGNAEALITREHMIPREAVRQNDRVRAYLLGVNEENRGPQLFASRACPDMLVELFKIEVP
EIGEELIEIKGAARDPGSRAKIAVKTNDQRIDPVGACVGMRGARVQAVSNELAGERIDIV
LWDDNPAQLVINAMQPAEVASIVMDEESHSMDIAVEDESALAQAIGRSGQNIRLASELTG
WELNVMTIDDAESKQEQEAEQALQTFINELEVDEDVAGVLVDEGFSTLEEVAYVPEEEML
AIDGFDEEIVELLRQRAKDALLTKALVSEEKFDQAEPAEDLLNMEGMDRELAVELASRDI
VTMEDLAEQAVDDLLEIEGLSEERAAELIMTARAPWFEGEDEAGA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
gtgctcggttgcagccccgcttcaattgagtacgccctgaagaactttagtctttgtaaa
ggcctggccatgaacaaagagatcctgctggtagcggaaaccgtatcaaacgagaagggt
gtaagccgcgacgtaatttttgaggccattgaactggctctcgcggcagctaccaagaag
cggttcaagcaagaagacgtggaaattcgtgtggatattgaccgtgagtccggtaatgcc
cgcagctttcgtgtatggcacgtagtgcctgatgaagaactctttgaattcggtaagcaa
ctgacattggatgaagcccacgagcaggatacgtctctgcagatcggggacatctgggaa
gaggaagttgaatccgaagcctttggtcgtattgctgcgcaaactgctaagcaggtcatt
gtacagaaagtacgtgaagcggagcgtcgtcaaattgttgaggaatatcgtgatcgcatt
ggcgacttggtcagtggcacggtaaagaaagccagccgtgattctatcgtgctggacttg
ggcggcaacgccgaagcactgattactcgtgaacacatgattccccgtgaggccgttcgc
caaaacgaccgtgtccgtgcctatctgctgggcgtaaatgaagaaaatcgtggtccgcag
ctgtttgccagccgtgcttgcccggacatgttggtggagctgtttaaaattgaagtgcca
gagatcggtgaagagctgatcgaaattaaaggcgctgctcgtgatccaggctcccgagcc
aaaattgccgtaaagaccaatgatcagcgtattgatccggttggcgcttgcgtaggcatg
cgtggtgcgcgggttcaggccgtttccaatgagctggctggtgagcgtatcgatattgtc
ctgtgggacgacaaccccgcacagctagtgattaatgcaatgcagccggcggaagtggct
tccattgttatggatgaagaaagccattccatggatattgccgtggaagatgagtctgca
ttggcccaggctatcggccgtagtgggcagaacattcgcctagcgtctgagttaaccggc
tgggaactcaacgtcatgaccattgatgacgctgagagcaaacaggaacaagaagccgag
caagccctgcaaacattcatcaacgagttagaagtagatgaagatgtggcgggtgtgcta
gtggatgaaggtttctctacccttgaagaagtggcctatgtgccagaggaagagatgctg
gctatcgacggctttgatgaggagatcgtagagcttttacgccagcgtgccaaagatgcg
ctgttgactaaagccctggtatctgaagagaagtttgatcaagccgagcccgcggaagac
cttctcaacatggaaggtatggatcgcgagttggctgttgaattggcttcccgtgacatt
gttacgatggaagacctcgccgaacaggcagtggatgacctgctggaaattgaaggcctg
agcgaagagcgtgcagccgagttgattatgactgcgcgcgcgccttggtttgaaggtgaa
gacgaagccggggcgtaa
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