Alcanivorax borkumensis: ABO_0331
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Entry
ABO_0331 CDS
T00380
Symbol
truB
Name
(GenBank) pseudouridylate synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
abo
Alcanivorax borkumensis
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abo03016
]
ABO_0331 (truB)
Enzymes [BR:
abo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABO_0331 (truB)
Transfer RNA biogenesis [BR:
abo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABO_0331 (truB)
Prokaryotic type
ABO_0331 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CAL15779
UniProt:
Q0VSR9
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All DBs
Position
363476..364402
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AA seq
308 aa
AA seq
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MAKRRPRGRDLNGILLLDKSSGVSSNGALQMAKKMFAAAKAGHTGSLDPLATGMLPICFG
EATKFSQFLLESDKSYRVTAKLGVTTETGDADGNVVNTTEVSASAAQIEAALLSFKGDIE
QIPSMYSAIKHEGVPLYKLAREGITVERKPRPVTIYDLRILRIDGDELEFEVDCSKGTYV
RSLVEDTGALLGCGGHVTALHRLSAGPYPAERMLTLEQLGKIKETGGFEAIDELLLPLST
SVADWPRVELGDNAAYYLQQGQPVMASDRPLDGWVSVYQASSGEFLGVGEILEDGRIAPR
RLVAGGAS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaagcgtcgtcctagaggccgtgatctcaacggcatcctgttattggataaatcc
tccggcgtgagcagtaatggcgcgctgcaaatggcaaaaaaaatgtttgctgccgctaaa
gcgggccatactggcagcttggatccgttggccacgggcatgctacccatctgtttcggc
gaggcgactaagttcagccagtttctgttggagtcggacaagagctaccgagtaaccgcc
aagctgggagtgactacagaaactggcgatgcggacggcaatgtggtgaacactacggaa
gtgtccgcctctgccgcccagattgaagcggcgttgttgtcatttaagggcgatatcgag
caaattccaagcatgtattcggcgattaagcatgaaggtgtgccgctctataagctggcc
cgtgagggtatcaccgtagagcgtaagcctcggccggtgacgatttatgatttgcgaatt
ctacgtatcgacggcgatgagctggagttcgaggtggactgctctaaaggcacctatgtg
cgctcactggtggaagatacaggggctctgttagggtgcggcgggcatgtgaccgctcta
catcgcctgtctgcgggaccttacccggcagagcgaatgctgaccttagagcagctgggt
aaaatcaaggaaaccggtggttttgaggcaatcgatgagctgctcttgcctttatccacc
agcgtggcagactggccgcgcgttgagttgggtgacaatgctgcttactacttgcagcaa
gggcagccggtgatggcctcagaccgccctctggacggctgggttagcgtttatcaggcg
tccagtggtgaatttctgggtgtcggagaaatattggaagacgggcggattgctccccgt
cgtctggttgcaggcggagcctcttga
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