Alcanivorax borkumensis: ABO_0471
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Entry
ABO_0471 CDS
T00380
Name
(GenBank) sigma-54 dependent DNA-binding response regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
abo
Alcanivorax borkumensis
Pathway
abo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABO_0471
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
abo02022
]
ABO_0471
02035 Bacterial motility proteins [BR:
abo02035
]
ABO_0471
Two-component system [BR:
abo02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
ABO_0471
Bacterial motility proteins [BR:
abo02035
]
Pilus system
Twitching motility proteins
ABO_0471
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
HTH_28
HTH_50
Pre_tape_measure
AAA_19
TIP49
AAA_16
HTH_1
cREC_REC
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CAL15919
UniProt:
Q0VSC9
LinkDB
All DBs
Position
complement(511420..512814)
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AA seq
464 aa
AA seq
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MSAEAPHVLVVDDEADLRELLVITLGRMKLQATAADSLSTAKQRLKEAHYDLCLTDMNLG
DGTGLELLQFISQYCPTMPTAVITAYGSMKTATDAMKYGAYDFIAKPVALDRLRQLIEDG
LGINEVEEHHEEEDNLIGDAPSMVALKSQVRKLARSQAPIYISGESGSGKERIARLIHTL
GPRREKPFVAVNCGAIPSELMESEFFGHRKGAFTGAVEDRKGLFREADGGTLFLDEVADL
PLHMQVKLLRAIQEKSVRPVGEAKEFQVNLRILCATHKNLEDEMEEGRFRQDLFYRLNVI
EAHVPPLRERREDIPKLVRHILDRLSQAWEIPPPSVSSDAVNAIGNYAFPGNVRELENTL
ERALTLCDGNTILPEHLRLPSNRSGLASNRSSTSTSPPPIRPSEQSLEEFLQEIEKQEIL
KALDTTHWNRTAAAKKLGMTFRSLRYRLKKLELDRDDDETDDNE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagaagccccccacgtattggttgttgacgatgaagctgacctgcgcgaactg
ctggtcatcacgctcggccgcatgaaacttcaggccaccgccgccgactctctgtccact
gccaaacagcgccttaaagaggcacactacgatctctgcctgacagatatgaacctgggg
gatggtaccggcctagagcttctccaattcatttcacaatattgtccgactatgcccact
gccgtaataaccgcctacggcagcatgaaaaccgccaccgatgcgatgaaatatggcgcc
tatgattttattgccaagcctgtcgctcttgaccgattaaggcagttaattgaagacggg
ctgggcatcaacgaagtcgaagaacaccatgaagaagaagataatctgattggtgacgcg
cccagcatggtcgcgctaaaaagccaggttcgaaagttggcgcgcagccaagcgcctatt
tatataagtggcgaatcaggaagcggtaaagagcgtatcgcacgattaattcacacgtta
ggaccgcgccgggaaaaaccgtttgtggcagtaaactgcggcgccataccgtctgaacta
atggaaagtgaattttttggccatcgcaaaggcgcatttaccggcgcggtggaagaccga
aagggactgttccgcgaagctgatggcggcaccttatttctcgatgaagtggccgacctt
cccttacatatgcaggtcaaactgctacgagccattcaggaaaaatccgttcgaccggta
ggcgaagccaaggaattccaagtcaatctacggattctctgcgccacccacaagaacctg
gaagacgaaatggaagaggggcgttttcgtcaggatcttttctatcggcttaatgttatc
gaggctcacgttccgccgttacgcgagcgacgtgaagatattccaaagctggttcggcat
attctcgaccggctcagccaagcctgggaaattccgccgcccagcgttagctctgacgcg
gtgaatgccattggcaactacgcgtttcccggcaatgtcagggagttggaaaacaccctg
gagcgggcgctaacattgtgtgacggcaacactattctccccgaacacctgcgcctacca
tcaaaccgttctgggctggcctcaaaccgttctagcacttcaacctcgcccccccccata
agacccagcgaacagtccctggaagagtttcttcaggaaatcgaaaaacaggaaatactc
aaggctctggatacaactcactggaatcgtaccgccgccgcaaaaaaactcggcatgacc
ttccgctctttgcgctaccgattgaaaaagctggagctggaccgtgatgacgacgaaaca
gacgataacgaataa
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