Alcanivorax borkumensis: ABO_0479
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Entry
ABO_0479 CDS
T00380
Symbol
clpB
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
abo
Alcanivorax borkumensis
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
abo03110
]
ABO_0479 (clpB)
Chaperones and folding catalysts [BR:
abo03110
]
Heat shock proteins
HSP100
ABO_0479 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
TniB
AAA_14
IstB_IS21
nSTAND3
AAA_24
DUF815
ATPase_2
bpMoxR
AAA_7
NBD_SMAX1
AAA_18
Mg_chelatase
ABC_tran
NACHT
AAA_25
Zeta_toxin
AAA_19
ResIII
T2SSE
DNA_pol3_delta2
PduV-EutP
Cob_adeno_trans
Motif
Other DBs
NCBI-ProteinID:
CAL15927
UniProt:
Q0VSC1
LinkDB
All DBs
Position
519451..522048
Genome browser
AA seq
865 aa
AA seq
DB search
MRMDKLTARLQEALSDAQSLAVGQGNSTIEPVHLMLALMQQQGGAARPLLEKAGANVADV
ITALNMAVDKLPTVTNFNGDVQMGQATGRMLNIADREAQQRGDQYLSTEVVLLAACDDSG
ELGKLFKNAGVTRKVLAEKIAEVRGGETVNDPNAEDKREALDKYTVNLTERAESGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKQVLSL
DMAALIAGAKYRGEFEERLKAVLNELAKQEGRIILFIDELHTMVGAGKGEGSMDAGNMLK
PALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEVH
HGVDITDGAIIAAARLSHRYITDRQLPDKAIDLIDEAGSRIRMEIDSMPEEMDRLDRRLI
QLKMEREALRKEDDDASRKRLEKLEDEIDELEKEYADLEEIWQAEKAALQGAAEYKAELE
QARVELEQARRAGDLSRMSELQYGEIPELEKKVQDAQDREEQAQTETQLLRNKVTDEEIA
EVVAKWTGIPVSKMLEGEKDKLLRMEDALHDRVVGQNEAVEAVANAVRRSRAGLSDPNRP
NGSFLFLGPTGVGKTELCKALANFLFDTEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYE
EGGYLTELVRRKPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMT
SNLGSDLIQKLAGSDAESASDYETMKSAVMEVVGNHFRPEFLNRVDETVVFHPLAKDQLK
GIASIQLGFLRKRLAEREMSLELSDAALDQLVDAGFDPVYGARPLKRAIQQQLENPLAQS
LLKGEYVQGDTIHVDVEEGRFTFGR
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatggataaactcactgcccgcctgcaggaagcgctgtcagacgcgcaatccttg
gccgtggggcagggtaatagcaccattgagccagttcatctgatgttggcgttgatgcag
cagcagggaggcgccgctcggccgttgttggaaaaagcaggcgccaacgttgccgatgtg
attaccgccctgaacatggctgtggacaagctgcccacggtgactaacttcaatggtgat
gtgcagatgggacaagccaccgggcggatgctgaatattgccgaccgggaagctcagcag
cgcggtgaccagtatctttctacggaagtggtgttgctggcggcctgtgacgatagcggt
gagctgggtaagctgtttaagaatgccggcgtcactcgtaaggtgctggctgaaaaaatt
gctgaagtacgagggggcgaaacggtgaacgatcccaacgcggaagacaaacgtgaagcg
ctagataagtacaccgtgaacctgaccgagcgagcggaatccggcaagcttgacccggtg
atcggccgggacgacgaaattcgccgtactattcaggtcttgcagcgtcgcaccaagaac
aacccggtattgatcggtgagcccggggtgggcaagaccgccattgtcgaaggccttgct
cagcgtattgtgaatggcgaagtccctgaaggcttgaaggacaagcaagtgctctcgctg
gatatggccgcgctgatcgcgggtgctaaatatcgaggagagttcgaagagcgcttgaaa
gcggtactcaacgagttggctaagcaggaagggcgcatcattcttttcattgatgagctg
cataccatggtcggcgccggcaagggtgaagggtccatggatgcgggcaatatgctcaag
ccggcactggctcggggtgagctgcactgtgtgggtgctaccacgctggacgaataccgg
cagtacattgagaaagatgccgcgctggagcgtcgttttcagaaagtgctggtggatgag
cccacggtggaagacaccattgccattctgcggggcttgaaagagcgttacgaagttcac
catggcgtggacatcaccgatggcgccatcattgccgctgctcgcttgagtcatcgctac
attaccgatcgacaactgccggataaggccattgatctgatcgacgaggccggcagccgt
atccgtatggaaatcgactctatgccggaggaaatggaccgcctagatcgccgtttgatc
cagctgaaaatggagcgtgaagcgctgcgcaaggaagacgatgatgccagccgcaagcgg
ctggaaaagctggaagatgagattgatgagctggaaaaagagtacgcggatctagaggaa
atttggcaggcggagaaagccgcgttgcagggcgcagccgaatataaggcggagctggag
caggctcgtgtggagctggagcaggcccgtcgcgccggcgacctgagccgtatgtccgaa
ctgcagtacggcgaaattccggaactggaaaagaaagttcaggatgcccaggaccgggaa
gaacaagcccaaactgagacgcagctgctgcgtaacaaggtcaccgacgaggaaattgct
gaggtggtggccaagtggaccggcattcctgtatcgaaaatgttggaaggtgagaaagac
aagttgctgcgtatggaagatgccttgcatgatcgggtggtcggccagaatgaggctgtt
gaggcggtggctaatgcggtacgccgctcccgggcagggttgtcagatccgaatcgaccc
aacggcagcttcctgtttctgggccccaccggggtgggtaaaacggaactttgtaaggcg
ctggccaacttcctgttcgacaccgaagaggccatggttcgcatcgacatgtctgagttt
atggaaaaacattccgtggctcggctggtcggtgcccctccgggctatgtgggttatgag
gaaggcggctacctcaccgagttagtgcgacgtaaaccttactcggtggtgttgctggac
gaggtggaaaaagcccacccggatgtgttcaacattctgttgcaggtgctcgatgatggt
cgcctgacggatggccaaggccgtaccgtggacttccgcaatactgtggtggtgatgaca
tccaacctgggttctgatctgattcagaagctggcaggttctgatgccgaatctgctagt
gattatgaaacgatgaaatcggcggtgatggaggtggtaggtaaccacttccgcccggag
ttcctcaaccgagtagatgaaaccgtggtgttccatccgctggccaaagatcagctcaag
ggcattgcgtccattcagttgggtttcttgcgcaagcgattggcggagcgggaaatgagc
ctggagctgagtgatgcggcgcttgatcagctggtggatgccggttttgatcccgtctac
ggggctcgtccgcttaagcgggctatccagcagcagttggaaaatccgctggctcaatcg
ctgctgaaaggcgagtacgttcagggcgataccattcacgtggatgtggaagaggggcgg
tttacgtttggccgttaa
DBGET
integrated database retrieval system
