Alcanivorax borkumensis: ABO_0596
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Entry
ABO_0596 CDS
T00380
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
abo
Alcanivorax borkumensis
Pathway
abo00470
D-Amino acid metabolism
abo00550
Peptidoglycan biosynthesis
abo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABO_0596 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABO_0596 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
abo01011
]
ABO_0596 (murD)
Enzymes [BR:
abo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
ABO_0596 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
abo01011
]
Precursor biosynthesis
Amino acid ligase
ABO_0596 (murD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
CAL16044
UniProt:
Q0VS04
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All DBs
Position
653512..654837
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AA seq
441 aa
AA seq
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MAKDGFDLVIGLGVTGRSVIRYLTDQGMPVRAIDTRAEPVGLDALCADFPDLKVHTGGFK
KGWMGKARRLIVSPGVAVSTPAIAEQVVDGKEVIGDIELFARAASEPLVAITGSNAKSTV
TTLLGQVADACGMNPGIGGNLGVPALELLDDQARLYVLELSSFQLETTYSLSAEVATVLN
VSQDHLDRYASFADYLAAKQRVYDGCQVAVWNRDDLATRPPATVARQISFGAHPEADYRL
DSENGQLLCRGEPLLSLSELALTGHHNAMNILSVLAISDALSLNRDKALATVKTFTGLPH
RCQLVAESGGVRWFNDSKATNVGATLAALTGIGESIEGKVILVAGGLGKGQDFSPLAEPA
RQYLRAALLMGEDRTTVAQGMSAAPCELVADMAVAVRRAHALAQPGDAVLLSPACASFDQ
YSGFAARGDDFTTRAQELCHD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagacgggtttgatctggtcattggcctgggtgtaacaggccgctccgtgatc
cgctatctaacggatcagggtatgcccgtgcgcgccatagatacccgtgctgaaccggtc
ggcctagacgccctgtgcgcagactttccggacctaaaagtgcataccggtggcttcaag
aaaggctggatgggcaaggcccgtcgtctgatcgtgagcccgggtgtggcggtgtccacg
cccgccattgccgagcaggtagtggatggcaaagaagtgatcggcgacattgagctgttc
gcccgtgcggccagtgagccgctggtggccatcaccggttccaatgccaaaagcacagtg
acaacgctgctggggcaagtggcagatgcctgtgggatgaacccaggtatcggcggcaac
ctgggtgtgccagcgctggaattgctggacgaccaagcgcggttgtacgttcttgagttg
tccagctttcagttggaaaccacttacagcttgagtgcggaagtggccacagtgttaaac
gtgtcccaggatcatttggaccgttacgccagctttgcagattacctagcggctaagcag
cgcgtctatgacggctgccaggtggcggtctggaatcgtgatgatttggcaacccgtccg
ccggctacggtggcccggcagatcagttttggcgcccacccggaagcggattaccggcta
gatagcgaaaacggtcaactactgtgccgaggcgagcccttattgtcgctgtcagagctg
gcgctcaccggccaccataatgccatgaatattctctcggttctggcgatcagtgatgcg
ctgtctttgaatcgggataaagcactggccacagtgaaaacctttactgggctgccgcat
cgttgccagctggtcgccgaatcaggtggtgtgcgctggtttaacgattcgaaggccacc
aatgtgggcgccaccttggcggcgctgaccgggatcggtgaaagcatcgagggcaaagtg
attctggtcgctggtggcctaggcaaagggcaggatttctctccgctggccgagcctgcc
cggcagtatttacgtgccgccctattgatgggtgaagaccgtactaccgtggcacagggc
atgtctgcggcgccctgtgaactggtggcagatatggctgttgcggtacgtcgcgcccat
gccctggcacagccgggcgatgccgttttactgtcaccggcctgtgcctcgtttgatcag
tacagcggttttgctgcccgcggcgatgatttcaccacccgtgcccaggagttgtgccat
gactga
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