Alcanivorax borkumensis: ABO_0600
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Entry
ABO_0600 CDS
T00380
Symbol
ddlB
Name
(GenBank) D-alanine-D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
abo
Alcanivorax borkumensis
Pathway
abo00470
D-Amino acid metabolism
abo00550
Peptidoglycan biosynthesis
abo01100
Metabolic pathways
abo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABO_0600 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABO_0600 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
ABO_0600 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
abo01011
]
ABO_0600 (ddlB)
Enzymes [BR:
abo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
ABO_0600 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
abo01011
]
Precursor biosynthesis
Amino acid ligase
ABO_0600 (ddlB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
TTL
Motif
Other DBs
NCBI-ProteinID:
CAL16048
UniProt:
Q0VS00
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All DBs
Position
658464..659387
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AA seq
307 aa
AA seq
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MDKRALKERLSRVGRVAVLAGGRSAERAVSLKSGAAVHAGLRNLGLLAELVDPADKSVDT
LRGFDAAFIALHGRGGEDGVIQGVLEHLEIPYTGSGVMASAIGMDKVRTKQLWKGAGLPT
PAFYVAGREEAELGFPVIVKPAHEGSSIGMAKADNTEELGEALVAAEKFDQDVLVEAWVN
GPEYTVAVLGDEALPAIRLQTPHVFYDFEAKYQSDSTEYLCPAGLDDADEQALRTLALTA
FRVAGCRGWGRVDVMRDEQGQWQLLEVNTVPGMTDHSLVPMAAKATGRDFDVLVGEILLD
ALERGRG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggataagcgtgcattgaaagaacgattgagccgagtaggccgcgtggcagtgctggct
ggtggtcgatctgcagaacgcgctgtgtcgctgaagagcggtgctgcggtacatgcaggc
ttgcgtaacttgggtttgctcgcagagctggtggacccggcggataagagcgtcgatacc
ttgagagggtttgatgccgcctttattgccttgcatggccgcggtggcgaagacggcgtg
attcaaggcgtattggagcaccttgagattccctacacaggctccggcgtgatggcgtcg
gctatcggcatggacaaggtacgtaccaagcagctgtggaaaggtgcgggtttgcccacg
ccagccttttatgtggctgggcgtgaagaggcagagttgggctttccggtgatcgtcaag
ccagcccatgaagggtcgtccatcggcatggccaaggccgataacaccgaggaactgggc
gaagcgttagtggccgcggaaaaatttgatcaggacgtgttggttgaagcctgggtcaac
ggcccggagtacaccgtggcggtgctgggtgatgaagctttgccggctatccgcctgcaa
acgccccatgtcttctatgactttgaagccaagtaccagtccgacagcacggagtattta
tgtccggctgggctggatgatgctgatgagcaggcgttgcgcacgttggcgctcacggca
ttccgcgttgccggatgccgtggctggggccgggtagatgtcatgcgtgatgagcaaggc
cagtggcagttgctggaagtgaatacggtgccaggtatgaccgaccattctttagtgccg
atggctgcgaaagccactggccgtgatttcgatgtgctggtaggtgagattctgctggac
gcgctggagcggggtcgtggctaa
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