Alcanivorax borkumensis: ABO_0784
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Entry
ABO_0784 CDS
T00380
Name
(GenBank) periplasmic binding domain/transglycosylase SLTdomain fusion
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
abo
Alcanivorax borkumensis
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
abo01011
]
ABO_0784
Enzymes [BR:
abo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ABO_0784
Peptidoglycan biosynthesis and degradation proteins [BR:
abo01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ABO_0784
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Phosphonate-bd
NMT1
DUF3834
Motif
Other DBs
NCBI-ProteinID:
CAL16232
UniProt:
Q0VRG6
LinkDB
All DBs
Position
complement(876301..877704)
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AA seq
467 aa
AA seq
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MTELFRHSKHLLASLALLSVLGLMLAMHPSPSAIERIMARGELVVLTRPSNTTYYEDQHG
FTGMEYELAKGFADSQGVELRILESDDLSYIRYAIRKGTADIVAAGLIATPERSKSLRFS
TAYQNVDVLLVRRLTSHRITDLSQLNQQTIAVSAGSSHAELLLKAQLESPELEFQEVENA
TPEQLLALVEDGQVDYTLINSNSYTLQRALWPDLVADYTVARDMPLSWAFNPKDDKSLYQ
EAQRYLTQAKADGTTAKLEDRFYGHVEQFNLYAARSFMRHLDDRLPLYEDLFKQAEEDSG
FDWRLLAALAYQESLWDPQAISPTGVKGLMMLTNNTARQMGISDRTDPSQSIRAGAGYLR
RTHARIPDRIPEPSRTWMALAAYNVGYGHLEDARVLTQRQGGNPDNWQDVKQRLPLLAKP
AYADQLRYGTAPGGQAVAYVRHIRRYYDLLVWAENSRRRDDTLIALN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgacagaactctttcgacatagcaagcatttgctcgcctcgctggcgctgctcagcgta
ttggggctaatgttagcgatgcatcccagcccctctgccatagagcgcatcatggcccgt
ggcgagctggtggtcctgacgcgtccatccaacaccacctattacgaagaccagcacggc
ttcaccggtatggagtatgaactcgccaaagggttcgctgacagccagggcgtggagttg
cgtatcctcgaatccgacgacctgtcctacattcgatatgccatccgcaaaggtaccgct
gatattgtcgcagccggcctgatcgccactccagaacgtagcaagagtctgcgtttcagc
accgcctatcagaatgtcgatgttctgctagtccgccgccttaccagccaccgaattact
gacctaagccaacttaaccagcaaaccattgccgtaagcgcaggttccagccacgcagag
ctgcttctcaaggcacagcttgagagcccagagttagaattccaagaagtggaaaatgcc
actccggaacaattactggccttggtggaagacggtcaagtggattacaccctgatcaat
tccaacagctataccctgcagagagccctctggcccgacctggtcgccgattacaccgtc
gccagagacatgcctctgtcgtgggcatttaaccccaaagacgataaaagcctataccag
gaagcacagcgttacctgacccaggccaaggcagacggcaccaccgccaaactggaagac
cgtttttacggccatgtagaacagttcaacctttacgcagcgcgcagctttatgcgtcac
ttggatgatcgactgcctctatacgaagatctattcaagcaagctgaagaagacagcggc
tttgactggcgcttactggccgccctcgcctaccaagaatccctgtgggacccgcaagcc
atctcgcccaccggcgtgaaaggcttgatgatgctcacgaacaatactgctcgccagatg
ggcatcagcgatcgaactgacccatcacaaagtatccgtgccggcgccggctacctgcgc
cgcacccatgcgcggattcccgatcgtattcctgagcccagccgtacctggatggcactg
gctgcctacaatgtggggtacgggcatttggaagatgcccgcgtactcacccagcgccag
ggcggcaacccggacaactggcaggacgttaaacaacgcctgcctctactggccaagccc
gcctacgcggatcaactccgctacggaacagcgccaggcggccaagcagtggcctatgtc
cgtcacattcggcgctattacgatctcttagtatgggcagaaaactcccgtcgtcgtgat
gacacactcatcgctctgaattaa
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