Alcanivorax borkumensis: ABO_0822
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Entry
ABO_0822 CDS
T00380
Symbol
oprF
Name
(GenBank) outer membrane protein OprF
KO
K03286
OmpA-OmpF porin, OOP family
Organism
abo
Alcanivorax borkumensis
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
abo02000
]
ABO_0822 (oprF)
Transporters [BR:
abo02000
]
Other transporters
Pores ion channels [TC:
1
]
ABO_0822 (oprF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
TSP_3
DUF748
Motif
Other DBs
NCBI-ProteinID:
CAL16270
UniProt:
Q0VRC8
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All DBs
Position
complement(915445..916599)
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AA seq
384 aa
AA seq
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MNAKRFLAASIACASVTATTTVIADDIPEQFFYFGGHISENWLDVGDHIDQNTSDSEVTL
PGAQMGYRFNRDWSFQGWWERNNSNTNLGGDADINIAHGAIRKHFAGNSAFEPYVGIGAG
ELRFEPTSNSSDDNAETIGTLETGFQTLLHPHFLLDVGARPYYSFDAERWDAEVYAGLNF
LIGGSSNEQEPAPIENVVTDSDGDGVPDDRDQCANTPAGAQVDATGCELDDDNDSIVNSM
DDCPNTPAGALVDDKGCQKYLEKDVKETLYVEFGHDKTEVRQTSYPSLENLAEDMRQYPS
ANLVLEGHTDSTGSAAYNKKLSQQRADAVKAVLVDKFGVSADRITTVGYGEEKPISDNKT
SEGRAENRRVETILKATTKEAQFQ
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctaaacgttttttagcggcgagcattgcttgcgcatcggtcaccgcgaccacc
actgtcattgctgacgacatccccgaacagtttttctacttcggcgggcacatcagtgaa
aattggctggacgtgggtgaccacattgaccaaaacaccagcgatagcgaagtgaccctt
cccggcgctcaaatgggttaccgctttaatcgtgactggtccttccaaggttggtgggag
cgtaacaactccaacaccaatctcggcggtgatgccgatatcaatattgcccacggcgca
atccgcaaacatttcgcaggcaactccgccttcgaaccctatgtgggtataggtgcgggt
gaactgcgtttcgagcctaccagcaacagctcagacgacaatgctgaaacaatcggcaca
ctggaaacgggtttccaaaccctcctccacccacactttctgctggacgtaggcgcacgt
ccttactacagctttgacgcagagcgctgggatgccgaagtttacgctggccttaacttc
ctaatcggcggttccagcaacgaacaagaaccggctccgatcgaaaatgtcgttactgat
agcgatggcgatggtgtgccagacgaccgggatcagtgcgccaacaccccagcaggcgcg
caggtagatgccactggttgtgaactggacgacgacaacgatagcatcgtcaacagcatg
gacgactgcccgaacactcctgctggggccctagttgatgacaaaggctgtcagaaatac
ctagaaaaggacgtgaaggagactctgtacgttgaattcggccacgataaaaccgaagtc
cgtcagacctcttacccgtctttggaaaacctagccgaagacatgcgccagtacccgtca
gccaacctagtactggaaggccatactgacagcactggttcagccgcttacaacaagaaa
ctgtcccagcagcgtgcagatgctgtgaaggccgtactggttgacaagttcggcgttagc
gcagatcgcatcaccactgtgggttacggtgaagagaagcctatctctgacaacaagacc
agcgaaggccgcgccgaaaaccgtcgcgtagaaactatcctgaaagcgaccaccaaagaa
gcgcagttccagtaa
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