Alcanivorax borkumensis: ABO_0914
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Entry
ABO_0914 CDS
T00380
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
abo
Alcanivorax borkumensis
Pathway
abo00521
Streptomycin biosynthesis
abo00523
Polyketide sugar unit biosynthesis
abo00541
Biosynthesis of various nucleotide sugars
abo01100
Metabolic pathways
abo01110
Biosynthesis of secondary metabolites
abo01250
Biosynthesis of nucleotide sugars
Module
abo_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ABO_0914 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ABO_0914 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ABO_0914 (rmlC)
Enzymes [BR:
abo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
ABO_0914 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CAL16362
UniProt:
Q0VR36
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All DBs
Position
1021922..1022473
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AA seq
183 aa
AA seq
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MEVIETRIPEVKLIKPKVFGDERGFFMETWNARAFAEAGIDATFVQDNHSRSVKNTLRGL
HYQIKQPQGKLVRCTRGEVFDVAVDLRKSSPTFGQWVGEILSEENQNQLWVPPGFAHGFL
VMTETADFQYKCTDFYAPEHDRCIHWADSKIGIDWPFEPEARSPLVSQKDAAGARLLDAE
VYD
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgattgaaacccgtattccagaggtaaagctcatcaagccgaaagtgtttggc
gatgagcgtggcttcttcatggaaacctggaatgcacgagcctttgccgaagccggtatc
gacgccaccttcgtccaggacaaccatagccgctctgtcaaaaatacccttcgcggcctt
cattaccagatcaagcagccccaggggaaactggtgcgctgtacccgtggtgaggttttt
gatgtggcggtagatctgagaaaaagctcgcccacctttggtcagtgggtgggggaaata
ctatcggaagagaaccagaaccagctgtgggtgccgccggggtttgcccatggttttttg
gtgatgaccgaaacggctgattttcagtataaatgcactgatttctatgctcctgagcat
gaccggtgcatccactgggctgattcaaaaattgggattgactggccatttgaaccagaa
gcgcgatcgcccctcgtatcgcaaaaggatgcggcaggcgcacggctgctggatgcagag
gtatacgattga
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