KEGG   Alcanivorax borkumensis: ABO_1127
Entry
ABO_1127          CDS       T00380                                 
Symbol
yoaA
Name
(GenBank) Probable ATP-dependent helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
abo  Alcanivorax borkumensis
Brite
KEGG Orthology (KO) [BR:abo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:abo03400]
    ABO_1127 (yoaA)
Enzymes [BR:abo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     ABO_1127 (yoaA)
DNA repair and recombination proteins [BR:abo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ABO_1127 (yoaA)
SSDB
Motif
Pfam: Helicase_C_2 DEAD DEAD_2 ResIII Helicase_C Glyco_tran_10_N
Other DBs
NCBI-ProteinID: CAL16575
UniProt: Q0VQH3
LinkDB
Position
1278870..1280876
AA seq 668 aa
MLTACILPAPSADTFQGNYVTTARNHLTDLVRFAPLLPGYQPREPQLEMADAVEDVIGSG
ATLLVEAETGTGKTLAYLVPALLSEGPTLVSTGTKSLQDQLFFKDLPMVKKALNLPRKVA
LLKGRANYLCPYRLELHQEDARFLTRETVGQMQIVSHWAARTRTGDIAELQQIPEDAPVW
PWVTSTADNCLGTECPRYNECPLMKARKEAQEADLVVVNHHLFFADAALRGNGAASELLP
TANTVIFDEAHQLPEIAAAFFADTLSTRQIQELGRDSLSEAGHTAADLAELNRLVAAVDK
SSMDLRLSLGDGERREPWTEVAENKAVIEAGEALLQALQELDAFLGPLAKASRGMDACSR
RASEQVDCLAAYLKGGQPNRVYWFETFKRSVVLHSTPLSVAAQLRAQRERNPCSWILTSA
TLSVGGRFEHIQHRLGLDSARTLRLESPFDFKRQAVFYAPEGLPAPNDSEYTAQLTAAMV
PVINAARGRTFFLFTSHRALREAAAILRQKLDYPLLVQGEAGRRELLDAFREKGNAVLLG
TSSFWEGIDVRGEALSCVIIDKLPFGSPGDPVAAARIEHINRNGGNAFRDYQLPQAVLAL
RQGAGRLIRDPKDTGLLVVADPRLLTRSYGKLFVNSLPNMTRTRKLDVVQRFFDYLAAQG
QEAGKMES
NT seq 2007 nt   +upstreamnt  +downstreamnt
atgttaacagcttgtattttgcccgccccgagtgcagacacgtttcagggaaattatgtg
actaccgcccgtaatcatcttaccgatttagtgcgctttgcgccgcttctgcctgggtat
cagccccgtgaaccgcaactagaaatggcggatgcggtggaagacgtgattggcagtggt
gccacgctgttagtagaagcggaaacgggcaccggtaaaacgctagcttacctagtgcct
gcactgctatcggaaggcccgacgttggtgtccactggcaccaaaagcttgcaggatcag
ctgttctttaaagacctgcccatggtcaagaaggcactgaacttgccgcgtaaagtggcg
ctgctaaaagggcgcgctaactacctatgtccgtatcgattggagctgcatcaagaagac
gcccgttttctcacccgtgagaccgtcgggcagatgcagattgtgtcgcactgggcagcg
cgcactcgcactggtgatatcgctgagctgcaacagattccggaagatgcgccagtatgg
ccctgggtaaccagcaccgcggacaattgcctgggaacggaatgcccccgctataacgaa
tgcccgttgatgaaggcacgtaaagaggctcaagaagcagacttagtggtggttaaccac
cacctgtttttcgccgatgcagcgttacgcggcaatggtgccgcctcggagttgctgccc
accgccaatacggtgattttcgatgaagcccatcagctacccgaaatcgcggcggcgttt
ttcgccgacacattgagcaccagacagattcaggaattgggccgcgatagcctgtctgaa
gcgggccataccgccgcggatctggcggagctaaatcgcctagtggccgccgtagataaa
agcagcatggatttgcgtttaagtctgggggacggcgagcgccgtgagccctggacggaa
gtggcagagaataaggcggtgattgaggccggagaggcactgttgcaggctttgcaggag
ctggatgcatttctcggaccgctggccaaggcgagccgggggatggatgcctgctctcgg
cgcgccagtgaacaggtggattgcctggccgcctacctgaaaggcgggcagccgaatcga
gtgtactggtttgaaaccttcaaacgctctgtggtcttgcacagcacgccgttgtccgtg
gcggcccagctgcgagcccagcgtgagcgcaacccgtgtagctggattctcacctcagcc
acgctgtcggtgggcggacgctttgaacatatccagcaccgtttggggctggattctgcc
cgtacccttaggttggagagccctttcgattttaagcgccaggccgtgttctatgccccg
gaagggctgccggcgccgaatgatagcgagtacacggcgcaactcaccgctgccatggta
ccggtcattaatgcagccaggggccgcacttttttcctgtttacgagtcacagagcgtta
cgtgaagccgcggctatccttcgccagaagcttgattaccctttgttggtgcagggtgag
gccgggcggcgtgaattacttgatgcgtttagggaaaagggcaatgccgtgttgttggga
accagcagcttctgggaaggcattgatgtacgtggtgaagcgctcagttgtgtgattatc
gataaactgccatttggttcacccggtgatccggtggcggcggcgcgcatcgagcatatt
aaccgcaatggcggtaatgcatttcgtgattaccagcttccccaagcggtgctggccctg
cgccagggagccgggcggctgattcgtgacccgaaagataccgggttgctggtagttgca
gacccgcgtttgctgacgcgtagttatggcaagttgttcgttaacagcctgcccaacatg
acccgtacccgtaagttagatgtggttcagcggttttttgattatctggccgctcagggc
caggaagcgggaaaaatggaatcatga

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