Alcanivorax borkumensis: ABO_1199
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Entry
ABO_1199 CDS
T00380
Name
(GenBank) conserved hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
abo
Alcanivorax borkumensis
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abo03016
]
ABO_1199
Enzymes [BR:
abo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ABO_1199
Transfer RNA biogenesis [BR:
abo03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ABO_1199
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
CAL16647
UniProt:
Q0VQA1
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All DBs
Position
1361558..1362073
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AA seq
171 aa
AA seq
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MRCFIGIPVVRPLADQCRMLSQGMGLATPAANLHLTLAFLGEQSASDLNGLKGSVSALAD
KHASFAQLFDRCEPFPRDQGPFIALTGKASSPLQQLHAGLEECLEFHGLPLESRSFRPHI
TLARPGAAVTSFQTMGEWVLPVNALWLYRSEWAEPLPTYECLARFALKTAL
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttttatcgggattccggttgtccgaccgcttgcagatcaatgcaggatgttg
tcccagggcatggggcttgctacccccgcggcaaatctacaccttaccctcgcgtttttg
ggtgaacagagcgcatcggatctgaatggcttaaaaggatcggtgtcagcactggccgat
aagcatgcgtcgtttgcacagctcttcgatcgctgtgagccgtttccccgtgatcaaggg
ccgtttattgcgttaacagggaaggccagttcgccgcttcagcagctccacgctggcctg
gaggagtgtcttgaatttcacggcttgccgttggagagcaggtcgtttcggccacatatt
actctggctaggcctggggctgcggtgacgtcttttcagactatgggtgagtgggtgttg
ccggttaacgcgctgtggctatatcgtagtgagtgggctgagccgttgccgacgtatgag
tgtctggcacgatttgccttgaaaactgcgctgtag
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