Alcanivorax borkumensis: ABO_1216
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Entry
ABO_1216 CDS
T00380
Symbol
oppF
Name
(GenBank) oligopeptide ABC transporter, ATP-binding protein
KO
K13896
microcin C transport system ATP-binding protein
Organism
abo
Alcanivorax borkumensis
Pathway
abo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ABO_1216 (oppF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
abo02000
]
ABO_1216 (oppF)
Transporters [BR:
abo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
ABO_1216 (oppF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
oligo_HPY
AAA_22
AAA_29
AAA_16
ABC_ATPase
TniB
nSTAND3
nSTAND1
NACHT
Mg_chelatase
CbiA
AAA_25
DUF87
RsgA_GTPase
DEAD
APS_kinase
SLFN-g3_helicase
ATP-synt_ab
AAA_23
MobB
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
CAL16664
UniProt:
Q0VQ84
LinkDB
All DBs
Position
complement(1383777..1385378)
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AA seq
533 aa
AA seq
DB search
MSLLRIEGLSIRFAGQLAVDDMSLELHPGRMLALVGESGSGKSLTALSVMDLLPENAQWQ
AESLQLDGTDLQSLNREQKRKLRGGRIGMIFQEPLTALNPLHTVEKQISESLFVHQGMSK
QRARERCLTLLEHVELPATADMLSRYPHQLSGGQRQRVMIAMALANEPQILIADEPTTAL
DVTVQETILDLIKRLQKELNLSILLISHDLGVVSRFAEDIVVMHNGKRVESGPTETVLSQ
PTQDYTRHLIEAEPQGRAKPLPDGTPVLLSATNIAVTFKGKRQSLFTPPSLLHAVDHINL
TLREGETLGIVGESGSGKSTLALALLRLIKSDGDIDMNGTDIRALSRTGLRQWRSHFQVV
FQDPYGSLNPRMTVGQIVAEGLAVHAPELRSTERENRVCRILEEVGLPITVRHRYPHEFS
GGQRQRIAIARALIMEPALLVLDEPTSALDRSVQHQILELLKALQQRRGLSYLFISHDLK
VIRAICHRVLVMKDGKPVEQGDTEAIFENPQQPYTQTLIDAAFANSRKQTVAL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttacgcatcgaagggctgagtattcgttttgccggtcagcttgccgttgat
gacatgtcgctggaactccatcccggccgtatgctggcgctggtgggcgagtctggttcc
ggaaaatccctcactgccctgtcggtgatggatctgctgccggaaaacgcacagtggcag
gctgaaagcctgcaactggatggcaccgatctacagtcactcaaccgcgaacagaaacgt
aaactgcgtggtggccgtatcggcatgattttccaggaaccgctgaccgccctcaatcca
ttacatacggtagagaaacaaatcagcgaaagtctgttcgtccatcagggcatgagcaag
cagcgggcccgcgagcgctgcctgacgctgttggaacatgtcgagctacccgccacagcc
gatatgctgagccgctatccgcaccaacttagcggcggccagcggcaaagggtcatgatc
gccatggcactggctaatgaacctcagatactcatcgccgatgagccaaccaccgccctg
gatgtaacggtacaagaaaccattctcgatctgatcaaacgcttacagaaagaattgaat
ctttccatactattgatcagccacgacttaggtgtagtcagccgttttgccgaggacatt
gtggtcatgcataacggcaagcgtgtggaatctggccccaccgagacggtattaagccaa
ccaacacaggattatacccgtcaccttatcgaggcggagccacaggggcgcgccaagcca
ttgcccgatggcacccccgtgctgctgagtgccaccaacattgccgtcactttcaagggc
aagcgccagtctctgttcacgccaccaagcctgctacacgcggtagaccacatcaatctt
accctgcgcgagggtgaaaccctgggtatcgttggtgaatctggctcaggtaaatcgacc
ctggccctggctttactgcgcttgatcaagagtgacggtgacattgacatgaatggcact
gatattcgcgccctctctcgcacaggattacggcaatggcgcagccattttcaagtggta
ttccaggacccctatggcagcctcaacccgcgcatgacagtaggccaaatcgtcgccgaa
ggcttggccgttcacgctccagagctgaggagtacagagcgggaaaatcgtgtctgccgc
attctcgaggaggtcgggttgcccattaccgttcgtcaccgttacccccatgagttttct
ggcgggcaacgccagcgcattgccattgcccgtgcgctcatcatggagcctgcattactg
gtgctggacgaacccacctcagcgctggatcgcagtgttcagcaccagatactggaattg
ctgaaggcactacaacagcgacggggactcagctatctgtttatcagccatgatctgaaa
gttatccgtgctatttgtcaccgtgtgttggtgatgaaagacggcaaacccgtggaacag
ggcgatactgaggccatttttgaaaacccacagcaaccgtacacccagacgctgatcgat
gcggcctttgccaacagcaggaaacagacggttgcactttga
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