Alcanivorax borkumensis: ABO_1225
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Entry
ABO_1225 CDS
T00380
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
abo
Alcanivorax borkumensis
Pathway
abo03030
DNA replication
abo03430
Mismatch repair
abo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABO_1225 (dnaQ)
03430 Mismatch repair
ABO_1225 (dnaQ)
03440 Homologous recombination
ABO_1225 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abo03032
]
ABO_1225 (dnaQ)
03400 DNA repair and recombination proteins [BR:
abo03400
]
ABO_1225 (dnaQ)
Enzymes [BR:
abo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABO_1225 (dnaQ)
DNA replication proteins [BR:
abo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABO_1225 (dnaQ)
DNA repair and recombination proteins [BR:
abo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABO_1225 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
CAL16673
UniProt:
Q0VQ75
LinkDB
All DBs
Position
1394912..1395655
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AA seq
247 aa
AA seq
DB search
MRQVVLDTETTGLEPNDGHRVIEIGCVEMENRRLTGNSLHLYLNPEREIDAGALAVHGIS
SEFLADKPTFDKVVDEFLAFVDGAELVIHNAPFDVGFLNHELRRLGTRYGTIEQRCGVLD
TLVMARQKHPGQKNSLDALCRRYFVENGHRELHGALLDAEILADVYLAMTGGQTRLFSGG
NDSSERGGGAAAETIRRLSADRVPLCVVRASENEQQRHRNKLAAIAKKNGVPTVWQSLGQ
NSDTPLQ
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaggttgtattggatacggaaaccacaggtcttgagccgaatgacgggcaccgg
gtgatcgaaattggttgtgtggagatggaaaatcgccgccttactggaaatagcctgcac
ctgtacctgaaccctgagcgggaaatcgatgcgggggcattggcggttcacggtatcagt
agcgagttcttggcggacaagcctacgtttgacaaagtggttgatgaatttttggcgttt
gtagatggcgctgaattggttattcacaacgcccctttcgatgtgggttttctcaaccat
gagttgcgccggcttggcacacgctatgggaccattgagcagcgttgcggggtgctggat
acactggtcatggcgcggcagaaacacccagggcagaagaatagccttgatgctctatgt
cgccgttatttcgtggaaaacgggcaccgtgaattgcacggagccctattggatgcggag
attctagcagacgtttatcttgccatgaccggggggcaaactcgccttttttcgggcggc
aacgatagcagtgagcggggcggtggcgccgcagcagagaccatcaggcgcttgagtgcc
gatcgcgtcccgctttgtgtggtgcgtgccagtgagaatgaacaacaacgtcaccgcaac
aagctggccgctattgcgaaaaagaatggggtgcccacggtttggcagagccttgggcaa
aatagcgatacgcccctgcaatag
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