Alcanivorax borkumensis: ABO_1342
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Entry
ABO_1342 CDS
T00380
Symbol
hemF
Name
(GenBank) coproporphyrinogen oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
abo
Alcanivorax borkumensis
Pathway
abo00860
Porphyrin metabolism
abo01100
Metabolic pathways
abo01110
Biosynthesis of secondary metabolites
abo01240
Biosynthesis of cofactors
Module
abo_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
ABO_1342 (hemF)
Enzymes [BR:
abo01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
ABO_1342 (hemF)
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Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
CAL16790
UniProt:
Q0VPV8
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All DBs
Position
complement(1522508..1523881)
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AA seq
457 aa
AA seq
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MVSWNKALIREHGGPGPRYTSYPPAPSFHSGIAEEDFWQAMDEGNAARRPLSLYIHIPFC
GSVCYYCACNRIITANKARSADYLRLLKQEIQRKAVHVDSRRPVTQMHWGGGTPTFLDDG
QLTELVYDLARHFNLRDDERSDYAIEIDPRTVDQSRLGLLRGLGFNRVSLGVQDLDPRVQ
KAVNRVQPYELIRDTMEWSRDFGFRSINTDLIYGLPWQSESSLARTLEQLLTLRPDRISL
YNYAHLPERFKIQRQIQEHALPDPEEKLNMLTRAGKMLNEQGYRYIGMDHFALENDSLSI
AQENGLLHRNFQGYTLHGDADLLGLGVSAISQIGNLYAQNHKALDDWQTSLEDRILPIEK
GFMLNRDDQIRRALIIQLLCDLSVDMLQFGDTWGINFADYFVDALTEWLTFEAQGLVTVE
NDRLFITETGRLVSRALVMPFDRYTQREQRTRFSRII
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggttagctggaacaaagcactgattcgtgagcatggcgggcccggtccacgctacacc
tcttacccgcccgctccgagctttcattcaggcattgctgaggaggacttctggcaagct
atggatgagggcaatgcggcgcggcggccactgtcgttgtacatccacatccctttttgt
ggcagtgtttgctactactgcgcgtgtaaccgcatcattactgccaacaaggcgcgctcg
gcagactacctacgtttactgaagcaggaaattcaacgcaaggccgtgcacgtggactcc
cgtcgccccgttacccagatgcactggggcggtggcacccccacctttttggatgatggc
cagctaactgagctggtgtatgacctggcccgccactttaaccttcgtgatgatgaacgc
agtgactacgctatcgaaattgatccgcgcacggtggatcaatcccgcttgggcttgcta
cgaggcctaggcttcaaccgtgttagtttgggtgtacaggatctagaccctcgcgtgcaa
aaggcggtcaatcgtgtgcagccctatgagctgatccgtgacaccatggaatggagccgc
gatttcggttttcgctctattaacaccgacttgatttacggacttccttggcaatcggag
tccagcttagcgcgtactctggagcaactgctaactcttcgtccggaccgcatctccctt
tataattacgcccacctgccggagcgtttcaaaattcagcgtcagattcaagagcacgcg
ctaccggatccggaagagaagctgaatatgttgacccgagcgggaaaaatgcttaatgag
caaggctatcggtatattggcatggaccatttcgcactggaaaacgatagcttatccatc
gcgcaagaaaatggtctgttgcaccgtaattttcaggggtacaccctccatggggatgca
gatttactgggcttgggcgtcagcgccatcagccagatcggtaacctctacgctcagaat
cacaaggccttggacgattggcaaacgagccttgaagaccgcattttgccaatcgaaaaa
ggctttatgctcaatcgcgacgaccagattcgtcgcgcgttaattattcaattactctgt
gatttatccgttgacatgcttcagtttggtgacacatggggcatcaattttgcggattat
ttcgtcgatgcacttacagagtggttaacgtttgaggcgcaaggactggtaacggttgag
aatgaccgattgttcattaccgaaactgggcgcttggtgagccgtgcattggtaatgcct
tttgaccgttacacccaaagggagcaaagaacccgatttagccggattatttaa
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