Alcanivorax borkumensis: ABO_1387
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Entry
ABO_1387 CDS
T00380
Name
(GenBank) S4 domain protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
abo
Alcanivorax borkumensis
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abo03009
]
ABO_1387
Enzymes [BR:
abo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
ABO_1387
Ribosome biogenesis [BR:
abo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ABO_1387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF348
Motif
Other DBs
NCBI-ProteinID:
CAL16835
UniProt:
Q0VPR3
LinkDB
All DBs
Position
complement(1581184..1582026)
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AA seq
280 aa
AA seq
DB search
MSEKLQKVLARAGLGSRRELETWISDGRVSVNGTVATLGDRVGSEDTLRVDGRIIKVKTE
EDTVQRVIMYHKPPGEVCSRNDPEGRPTVFDNLPRLQGMRWVQVGRLDINTTGMMLFTTD
GELAHRLMHPSNGFVREYAVRVRGVMTPEKRQAMLDGVLLEDGVSKFDSIEDAGGAEEGA
NHWYKATLTGGKYREVRRLFQSQDLEVARLMRIRFGDLTLPPQLRQGRWMELEPEQMKAL
IEKVDLKGKKYTGLYGRARLRHQRGGNKPPRKARRGPYRR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaattacagaaagtcctggctcgcgccgggctgggttctcgccgggagcta
gaaacctggataagtgacggtcgcgtctcggtcaatgggactgttgcgaccttgggtgac
cgggttggcagtgaagataccctacgtgtagatggcaggattattaaagtgaagaccgaa
gaagacaccgttcagcgcgtaatcatgtatcacaagccaccgggagaggtatgttcgcgc
aatgatcctgaagggcgcccaacggtgttcgataacctaccgcgacttcaaggtatgcgc
tgggtgcaggtggggcggctggacatcaatactaccggtatgatgctgttcactaccgat
ggcgaacttgcccaccgtctgatgcacccctccaacggtttcgtacgcgaatacgcagtg
cgggtccgcggtgttatgactccggaaaaacgtcaagccatgcttgatggcgttttactg
gaggatggcgtttctaaatttgatagtatcgaggacgctggtggcgctgaggaaggtgct
aaccactggtacaaagccactcttactgggggtaaataccgggaagtccgtcggcttttc
cagtctcaagacttggaagtggctcgcttgatgcgaattcgttttggcgatctgacattg
ccgccgcaattgcgccagggccgctggatggagctggaaccagaacaaatgaaagccctg
atcgagaaggtggacctcaagggcaagaaatataccggcctttatggccgtgcgcggcta
cgacaccagcgtggtggtaacaagccgcctcgcaaggctcgccgtgggccatatcgtcgc
tag
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