Alcanivorax borkumensis: ABO_1525
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Entry
ABO_1525 CDS
T00380
Name
(GenBank) periplasmic binding domain/transglycosylase SLTdomain fusion protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
abo
Alcanivorax borkumensis
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
abo01011
]
ABO_1525
Enzymes [BR:
abo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ABO_1525
Peptidoglycan biosynthesis and degradation proteins [BR:
abo01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ABO_1525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
SLT
Phosphonate-bd
SLT_4
AfAlkA-like_TBP-like
Motif
Other DBs
NCBI-ProteinID:
CAL16973
UniProt:
Q0VPC5
LinkDB
All DBs
Position
complement(1743830..1745929)
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AA seq
699 aa
AA seq
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MLMRLGIFMLICLGFMLLAGCDKEPEVGEVVSTFDNYLETGDLPAMKERGFIRLLAPRFD
EPSGLPRDGIPASEYQHQAEAFVEYLGLEPRWVYADNFSELGTLINQGVADIIITNYSVT
KARKKTLAFSTPVNAVQERLVVPRALADLALTEMGSLIVSVPDGSAYQETATKLAKRHQS
ISVEVLDSSISDEALVNGVANGEFAASIVDSNMLDVLLDEDGEAVAGPVLNRKRRIAWAV
RPSSTELLNQINQYITSERIITSDGSAEARDWEAIGERGVLRVITSNNPASYFMWRGELM
GFDYDLIKDFAKQHRLRVRVVVRDSPSAMFSALEAGEGDVIAASMTITSDRQLAGWAFSK
RYLEVNEQLIGEAGDVPLGSVQALAGRTVAVNPETAYYDTLKDLQATGLQFDIQEVFQAS
TEMLIEGVANGEYDLTMADSHLAAMESTYRDDIAVLFQFEPAKEIAWVTREPQKILRKQL
NNYIKRNYRGLFYNVTYNRYFVEKKTIAAHEAYRVEPGRNISPYDDLVREKSLEYGLDWR
LITSQMYQESRFNPNARSFAGAQGLLQVMPRTGRQFGYSNLTDPENGVSAGLAYIDWLEQ
RFPARLDLAEKLYFTLAAYNAGHGHVEDARRLAQRLGKNPDKWFGHVEEAMLLLSKPQYA
QQARYGYVRGREPVKYVREIKTRYLGYVSALGEQKQPEL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatgcgtttaggcatatttatgcttatatgcctcggtttcatgctgctagccggt
tgtgacaaggagccagaggtgggtgaggttgttagcacctttgacaactacctggaaacc
ggtgatttgcccgccatgaaagagcgtggttttatccggcttctggcccctcgctttgat
gaaccgtccggtctccctcgcgacggtattcctgctagtgaatatcagcatcaggccgaa
gcgtttgtggaataccttggacttgagccgcgctgggtgtatgccgataacttctctgag
ttgggcacccttatcaatcaaggagtggcggatatcatcatcaccaattattcggtgacc
aaggcccgcaagaagacgcttgctttttctacccctgttaatgcggtgcaagaacgtttg
gtggtgccacgggcattggcggacttagcgttgactgagatgggtagccttattgtgtca
gtgccggacgggtccgcttatcaggaaacggccactaagctggccaaacggcatcaaagc
ataagcgtagaggtcctggatagctccatatcggatgaagcgttggtcaatggtgtggct
aatggtgaatttgcggcctctatcgtagacagtaatatgctggacgtcttgttggatgag
gacggtgaagcggttgcagggccggtgttgaatcgtaagcgacgcattgcttgggcggtt
cgccccagtagtacggagttacttaatcagatcaatcagtatattactagtgagcggatc
attacttctgatgggagtgcagaagctcgtgattgggaggccattggcgagaggggcgta
ttgcgagtaattacttccaataacccggccagctattttatgtggcgtggcgaattgatg
ggctttgattatgatctgattaaagatttcgccaagcagcatcgtttgagagttcgggta
gtggtccgggatagtccgtctgccatgtttagcgcgctggaggcgggggagggcgatgtt
atcgctgcgtcgatgacgattacctctgatcggcagctagctggttgggcgtttagcaag
cgttacttagaagtgaatgagcaattgatcggtgaggctggcgatgtgccattgggatcg
gtgcaggcgctggctggtcgtaccgtagcagttaatccggaaacggcttattacgacaca
ctaaaagatctacaggcgactggactgcagtttgatatccaggaagtttttcaggcaagc
acggaaatgctgattgagggtgtggctaatggtgagtacgacctgaccatggccgatagc
catctggcggccatggaatccacctaccgagatgatatcgccgttttgttccagttcgaa
ccagccaaagagattgcctgggttacccgtgagcctcagaaaattttgcgcaagcagctg
aataattacataaagcggaattaccggggcttgttttataacgtgacgtataatcgttac
ttcgtagaaaagaaaaccatcgccgcccatgaggcctaccgggtggagccaggccgtaat
atctccccgtatgatgatttagtgcgggagaaatcgcttgaatatggcttggactggcgt
ttaatcacctcgcagatgtaccaagaaagtcggtttaacccaaacgctcgttctttcgcc
ggcgcccaaggattgttgcaggtaatgccacgcacaggtaggcaatttgggtacagcaat
ttgaccgatccggagaatggagtgtctgcaggcctagcgtatatagattggcttgagcag
cgttttcctgcgcggttagacctggcggaaaaactctactttaccttggctgcgtacaat
gcaggccatggccatgtggaagatgcacgtcgcctggcgcaacggctgggtaagaatcct
gacaagtggttcggtcatgtagaagaggccatgctgctgttatccaagcctcaatatgcc
cagcaggctcgttatggctatgtgcgaggcagggagccagtgaaatacgtgcgagaaatt
aagactcgatacttgggttatgtgtcagcgttgggggaacagaagcagcccgagctttaa
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