Alcanivorax borkumensis: ABO_1526
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Entry
ABO_1526 CDS
T00380
Name
(GenBank) conserved hypothetical protein
KO
K04659
thrombospondin 2/3/4/5
Organism
abo
Alcanivorax borkumensis
Pathway
abo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
ABO_1526
09142 Cell motility
04820 Cytoskeleton in muscle cells
ABO_1526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
abo04131
]
ABO_1526
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
abo04147
]
ABO_1526
00536 Glycosaminoglycan binding proteins [BR:
abo00536
]
ABO_1526
Membrane trafficking [BR:
abo04131
]
Endocytosis
Phagocytosis
Opsonins
ABO_1526
Exosome [BR:
abo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
ABO_1526
Exosomal proteins of colorectal cancer cells
ABO_1526
Exosomal proteins of bladder cancer cells
ABO_1526
Glycosaminoglycan binding proteins [BR:
abo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
ABO_1526
Domain-containing proteins not elsewhere classified [BR:
abo04990
]
Thrombospondin domain-containing proteins
Thrombospondins
ABO_1526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_3
Motif
Other DBs
NCBI-ProteinID:
CAL16974
UniProt:
Q0VPC4
LinkDB
All DBs
Position
complement(1746304..1747812)
Genome browser
AA seq
502 aa
AA seq
DB search
MNSLMKVLLSIMIAATLGMGLAGCEADGDSDSSGGGGNAVGNIADQDADGVPDSVDNCPA
NSNAMQEDLDGDGIGDVCDDDRDGDGVDNDADNCPLLANDSQEDADGDGVGDACDMDNDQ
DKDGTDDGVDNCPATFNPEQGDVDGDGKGDVCDDDSDGDGVDDANDNCAFTANNDQADTD
TDGVGDVCEDDRDGDTVLDDVDNCLSLPNTDQSDIDLDTVGDVCDEDRDGDGVDNDGTDS
SDNCPDTANNDQLDLDGDGIGNVCDDDFDGEVDLTDTDGDGVIDSEDNCPEIANEDQADD
DGDGIGNVCDDNGFTCSADSTFKQLTSADYTAEGDSLGGLFEFGVCLGCSVENADSVIDG
SNASYAQVNLGLALGGLLSNTRHSGAYVAVDAKDPANDISETIVGFVVSDPAASLVSLEL
LGDFVSILFINDGEIVHEVKRIEAHLLGLSLLGLGANTDQRFIAALAPSDVSFDSIQLNY
GGVLNLNKTLRVHDVCVGSPSF
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaactctttaatgaaagttttattaagcattatgatagcggccactcttgggatgggg
ttggctggttgtgaagccgatggcgatagcgatagcagtggcggaggtggtaacgcagta
ggtaatattgcggaccaagatgctgatggcgtgcctgatagcgtggataattgccccgca
aactcaaatgccatgcaggaagatctcgatggcgatggcatcggcgatgtttgcgacgat
gatcgtgacggtgatggcgtagataatgatgccgacaactgcccgctgctagcgaatgat
tctcaggaagacgctgatggtgatggtgttggtgacgcctgtgatatggataacgatcag
gacaaagacggcaccgatgacggcgtagataattgcccagcgaccttcaacccagaacag
ggtgatgtggatggcgacggcaaaggcgacgtttgtgacgacgactcagatggcgatggc
gttgatgatgccaacgacaactgtgcattcaccgctaacaacgaccaagctgatacagat
acagatggtgttggcgatgtgtgcgaagacgatcgtgatggcgacaccgtgttagatgat
gtcgataactgcttgagcctgcctaacactgaccagtctgatattgacctggatactgtt
ggcgatgtatgcgatgaagatcgtgatggtgatggcgtcgataacgatggcaccgatagc
agcgataactgtcctgatactgccaataacgaccagcttgacctagatggcgacggtatt
ggtaatgtttgtgacgatgactttgatggtgaagtcgatctgaccgacaccgatggtgat
ggcgtcattgacagcgaagacaactgcccagaaattgctaacgaagatcaagcagacgac
gatggcgatggcatcggtaatgtttgtgacgacaacggcttcacctgttcagctgacagc
acttttaagcagttgaccagcgctgattacacggcagaaggcgactccttgggcggtttg
tttgagtttggtgtttgcttgggctgttctgtggaaaatgccgactctgtgattgatgga
agtaatgcctcttatgcacaggttaacttgggcctggcattaggtggattgcttagcaac
accagacacagtggcgcgtatgtagcggttgatgccaaggatccagctaacgacatttca
gaaaccattgttgggtttgtagttagcgatccggctgcttcattggtgagcttggaactg
ctaggcgacttcgtttccattctgtttattaatgacggcgaaatcgtgcatgaagttaaa
agaattgaagcgcatttgctgggtctaagcttgctaggcttgggtgctaacacagatcag
cgctttattgctgcactagcgcctagcgacgtgtcttttgactccatccagttgaactat
ggtggtgttttgaatctcaataaaaccttgcgtgttcatgacgtgtgtgttggttcgcct
tcattctag
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