Alcanivorax borkumensis: ABO_1527
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Entry
ABO_1527 CDS
T00380
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
abo
Alcanivorax borkumensis
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
abo02000
]
ABO_1527
Transporters [BR:
abo02000
]
Other transporters
Pores ion channels [TC:
1
]
ABO_1527
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
DUF748
TSP_3
PagL
DUF3185
Motif
Other DBs
NCBI-ProteinID:
CAL16975
UniProt:
Q0VPC3
LinkDB
All DBs
Position
complement(1747827..1748915)
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AA seq
362 aa
AA seq
DB search
MKGSLHTSLLVAGVALATQGYAADETATKQYLAPMVHYLELDEDRDLSSKGLGAGLIYGR
QLSDHWWWETEGAGYGLDSGVAGAADYYQYTVSTGLAYAFGDREEEFTPFVLAQVGGIYN
DVVPDDDDGVDFHANVGLGAVTGPMFDNGLKMRAEARYMYDDFDGITGTISEDEGGFNDW
RFSLGLEMPLGRTKTVEVEKIVYETREVEKIVEVSAPDSDGDGIPDDRDQCPNTIQGGKV
DGEGCLLTNQTITFNNIGFELDSANITASSRPILDRLVKALKSQTNFDVEIAGHTDSSGS
AEYNEGLSDRRAKAVRQYLIDQGISSERLTARGYGEVVPVASNETASGRAMNRRVEFRVS
EQ
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaggaagcctacatacttcactattagtggcaggtgtcgcattagcgacgcaaggt
tatgcagcagacgaaacggcgacaaagcaatatcttgcgccgatggtgcattaccttgag
cttgatgaagacagggatttgtccagcaaggggttgggagcgggcttgatttatggccgt
cagctgtccgaccactggtggtgggaaactgagggcgcgggctacggcttggattcaggg
gtggcaggcgctgctgattactatcagtacacagtaagcaccggcttagcctacgctttt
ggcgatcgcgaagaagagtttaccccgttcgtactggctcaggtcggtggcatctataat
gatgtggtgccagatgacgatgacggcgttgattttcatgccaatgtggggctgggtgct
gtcaccggtccgatgtttgataacggcttgaaaatgcgtgctgaagctcggtacatgtat
gacgatttcgacggtattacgggcactatctcagaagatgagggcggttttaacgactgg
cgcttctctcttggcttggaaatgcccctcggtcgcactaagaccgtagaagtagaaaaa
atcgtctatgaaacccgtgaagtagaaaaaatcgttgaagttagtgcgccagatagcgat
ggggacggaatccctgacgatcgcgatcagtgcccgaatacgattcagggtggcaaggtt
gatggcgaaggctgtttgctaaccaaccagaccattaccttcaataacatcggttttgaa
ctggattctgccaatattacagcgagctcccgtccgattttggatcgtcttgtaaaagcg
cttaagtcacagaccaactttgatgttgaaatcgcaggccataccgactctagcggtagt
gccgagtacaatgaaggtttatctgatcgtcgtgctaaggctgtacgccagtacttgatc
gatcagggtattagttcagaacgccttaccgctcgtgggtatggtgaagtggttccggtt
gccagtaatgaaactgcatctgggcgtgcgatgaaccgtcgtgttgaatttcgtgttagt
gaacaatag
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integrated database retrieval system
