Alcanivorax borkumensis: ABO_1624
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Entry
ABO_1624 CDS
T00380
Symbol
ruma
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
abo
Alcanivorax borkumensis
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
abo03009
]
ABO_1624 (ruma)
Enzymes [BR:
abo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ABO_1624 (ruma)
Ribosome biogenesis [BR:
abo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ABO_1624 (ruma)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
TRAM
TRM5-TYW2_MTfase
Cons_hypoth95
PCMT
RrnaAD
Methyltransf_15
Methyltr_RsmB-F
Methyltransf_12
Methyltransf_11
Methyltrans_SAM
PrmA
Ubie_methyltran
CMAS
FtsJ
DOT1
Methyltransf_4
Methyltransf_23
UPF0020
Methyltransf_32
N6_N4_Mtase
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
CAL17072
UniProt:
Q0VP26
LinkDB
All DBs
Position
complement(1857803..1859140)
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AA seq
445 aa
AA seq
DB search
MARRRKQLPETPEPASIETLSHDGRGIARRDGKTTFIDNALPGEEVMFKFTYMRRKFDEG
KAVEIVTASPDRVTPPCEHSTLCGGCSLQHMSPEVQVSRKQAVLREQLAHFGGLEPEEWL
APLTGPVTGYRSKARMGVKYVEAKGETLVGFREKRNSFIAQLHTCEVLIPDVGHRIDELR
TLMHGLESRSRIPQIELAAGDDDVALIIRHLDPLSEADQQALLGFCQNLGWHCYLQPGNE
STVHRIWPQEGEQRLYYKHPSAGVELAFHPTDFTQVNAEINRKMVPLALDLLDISPDHTV
LDLFCGLGNFTIPAAKRAGKVVGVEVSQAMVERGYENARRNSLENLEFHAWDLSQDVSGQ
AWARQTYDRILIDPPRTGALEMVKLMPRLGASKIVYVSCNPATLARDAGELMALGYRLKA
AGVMDMFPHTTHVESIAVFEKMKKK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacgtcgcaagcagttaccggaaacgccggaacccgccagcattgaaaccctg
agtcacgatggccggggcatcgcccgacgcgatggcaaaaccacctttattgataatgca
cttcccggtgaagaggtgatgttcaagttcacctatatgcgccgcaagttcgatgaaggc
aaagccgtggaaattgtgactgcctcgccggatcgggtcaccccgccttgcgagcacagt
actctgtgtggtggctgtagcctgcagcacatgagccctgaggtgcaggtatcgcgcaaa
caagcagtattgcgcgaacaactagcgcattttggtgggctggaaccggaggaatggcta
gcgccgctgaccgggccggtaaccggttatcgcagtaaggcgcgcatgggcgtgaaatac
gtggaagccaagggcgaaacgctggtgggctttcgggagaaacgtaacagcttcatcgcc
cagttacacacctgtgaggtgctgattccagatgtgggccaccgtattgatgagttacgt
actctgatgcacggcctagaaagtcgtagtcgcattccgcagatcgaattggccgccggc
gatgacgacgtggcgttgattatccgtcacttggacccactgtctgaggcagatcaacaa
gccctgctgggcttttgccagaatctaggttggcactgttatctgcagccgggcaacgaa
agcacggtgcatcgtatttggccgcaagagggtgaacagcgcctgtactacaaacatccg
tcggcaggggttgaactggcctttcacccaacggatttcacccaggtgaatgcagaaatt
aaccgcaagatggtgccgttggcattggacttgctggatatctcaccggatcacacggtg
ctggacctgttctgcggcctggggaatttcaccattcctgccgctaagcgggccggcaag
gtggtgggcgtggaggtcagccaagccatggtcgagcgcggttacgagaatgcccgccgt
aacagcttggaaaacctggagtttcacgcctgggacctgagccaggacgttagcggccag
gcctgggccagacagacctatgaccgtatcttgattgatccgccgcgtaccggggcactg
gaaatggtgaaactaatgccccgccttggtgcgtccaagattgtttatgtgtcatgcaac
cccgccacattggcccgtgatgccggggaactgatggcgctgggctaccgtcttaaagcg
gccggtgtgatggatatgttcccccataccacccacgttgagtctatcgctgtattcgaa
aaaatgaagaaaaagtag
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