Alcanivorax borkumensis: ABO_1646
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Entry
ABO_1646 CDS
T00380
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
abo
Alcanivorax borkumensis
Pathway
abo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABO_1646 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abo03400
]
ABO_1646 (ung)
Enzymes [BR:
abo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ABO_1646 (ung)
DNA repair and recombination proteins [BR:
abo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABO_1646 (ung)
Prokaryotic type
ABO_1646 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
CAL17094
UniProt:
Q0VP04
LinkDB
All DBs
Position
complement(1881452..1882165)
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AA seq
237 aa
AA seq
DB search
MVNAYAVNTPDSKVVPLEPGWKQHLEGEFQRDYMAQLRHFLAQQKREGKTVFPPGPDIFN
AFNLTPFDCVKVVILGQDPYHGPNQAHGLCFSVQHGVKTPPSLMNIYKEIHRDLGFDIPT
HGNLTYWAEQGVLLLNAVLTVEAGQAGSHQKQGWETFTDQAIEHLNREREGLVFLLWGSH
AQKKGRLIDREKHCVLSAPHPSPLSAYRGFLGCGHFSRANQYLLQHGETAIDWSVPE
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgcctatgccgtgaacacccctgacagcaaagttgtgccgttggagccgggc
tggaaacagcaccttgagggggagtttcaacgggactatatggcgcagttgcgccatttt
ttagcgcaacagaagcgtgaaggaaaaacggttttcccgccggggccagatatttttaac
gccttcaacttgacgccctttgactgtgtgaaagtggtcatcctgggacaggacccttac
cacggccccaaccaagcccatggtctgtgtttttccgttcagcatggcgtaaagactccg
ccatcactgatgaatatctacaaggaaattcaccgagacctgggttttgatattcctacc
catggcaacttgacctattgggcagagcagggtgttttgctgcttaacgcggtgctcacc
gtggaagcgggccaggctggctctcaccagaagcaagggtgggaaacgtttaccgatcag
gccattgagcacttaaaccgcgaacgtgaggggttagtgtttttattgtggggcagtcat
gctcagaaaaaaggccgcctgatcgaccgcgaaaaacactgtgtgctaagcgctccacat
ccgtctccactgtcggcttaccgaggttttctcggctgtggtcacttttcccgtgccaat
caatatttgctccagcacggtgaaaccgctattgattggtccgtgccagaataa
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