Alcanivorax borkumensis: ABO_1651
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Entry
ABO_1651 CDS
T00380
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
abo
Alcanivorax borkumensis
Pathway
abo03410
Base excision repair
abo03430
Mismatch repair
abo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABO_1651 (recJ)
03430 Mismatch repair
ABO_1651 (recJ)
03440 Homologous recombination
ABO_1651 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abo03400
]
ABO_1651 (recJ)
DNA repair and recombination proteins [BR:
abo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ABO_1651 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABO_1651 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABO_1651 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
CAL17099
UniProt:
Q0VNZ9
LinkDB
All DBs
Position
complement(1886605..1888329)
Genome browser
AA seq
574 aa
AA seq
DB search
MPIDTPRLPKITRRPQYTPDWPDVPPMLARILAGRGVTDPALLDLGLKRLPHPERFTGLR
GAVALLLQGRTEQWRICIVGDYDADGATATTLMVRGLERLGYARPDFLVPDRFEYGYGLS
PAIVDLAKELYDPDLIITVDNGIASVDGVAAARAQGMRVLITDHHLPGETLPEADALVNP
RLPGCEDFPATNLAGVGVAFYLLMDLQRALREQGVAASAPITDLLDLVALGTVADVVVLD
DANRVLVEQGLRRIRAGKGCPGIRALLQVAGRDPNRVLAADMGFAVGPRLNAAGRLTDMT
QGIACLLAQTDAEATEMAQDLDTINRERRSIEHGMRDAAMEEVARLDADNLPAGLCLYGK
EWHEGVVGILASRVKEAIHRPVIAFAPAQQRGQLKGSGRSIPGLHLRDALDAVATANPGL
LSKFGGHAMAAGLSLELDKLEDFKAAFEKAVGELLSPKALERIVETDGELDDHELSLTNA
ELLSHRFPWGQGFPAPSFDGEFEVLKHRIVGERHLKLTLGLPGISGVIDAIHFNVAVEAL
PSRISKVRGVYRLEVNEFRGQRNPQLLFEHLIPL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcgacactcctcgcttgcccaagatcacccgtcgcccgcagtacacgccagat
tggccagatgtgccgcccatgctggcgcggattttggccgggcggggggtcaccgatccg
gcgttgctggatctgggactcaaacgcctgccacatcctgaacgcttcacagggttgcgt
ggggctgtggcgttgcttttacaagggcgaactgagcagtggcgcatttgtattgtcggt
gactacgacgcggatggcgccaccgctaccaccttgatggtgcgtggcctggagcggctg
ggctatgcgcgcccggattttctagtgccggaccggtttgagtatggctatggcctgtcg
ccggctattgttgatctggccaaagagctgtacgacccggacctgattatcaccgtggat
aacggtatcgccagtgtggatggcgtcgcggccgcacgggcccaaggcatgcgggtgctg
attaccgatcaccacttgcccggcgaaacgctgccggaggcggacgcattggtgaacccg
cgcctgcccggttgcgaagattttcctgccaccaatttggccggggtcggggtagcgttt
tatttattaatggatttgcagcgggcactgcgcgagcagggcgttgccgccagcgcgcca
ataaccgacctgttggatctggtggcactgggtacggtggcggatgtggtggtgttggat
gacgccaaccgggtattggtggagcagggcttacggcggattcgcgccggtaaaggctgc
ccaggaattcgcgccttgttacaggtggccgggcgtgatcctaaccgcgtgttggcggcg
gacatgggttttgcggtcggcccacggttgaatgctgcggggcggctcaccgacatgact
caaggcatcgcctgtctgttggcacaaaccgatgccgaggccaccgagatggcccaggat
ttggacaccatcaaccgtgagcgtcgctccattgagcatggtatgcgtgatgcggccatg
gaagaggtggcccgtctggatgcggataacctgcccgcaggcctgtgcctgtatggcaag
gagtggcacgaaggggtggtgggcattcttgcctcgcgggtgaaagaagccattcaccgg
ccggtgattgcttttgccccggcgcagcaacgtgggcaactcaagggttcgggccgttcg
attcccggtttgcacctgcgcgatgcgttggatgcggtggccacggctaacccgggcttg
ctgagtaaatttggtggccacgccatggcggcggggttgtcgctggagctggacaagctg
gaagacttcaaagccgcgtttgaaaaagcggtgggggagctgctgtcgccgaaagcgctg
gagcgcattgtagaaaccgatggcgagctggacgatcacgagctgtcgttgaccaatgca
gaactactcagccaccgctttccttggggccaaggtttccctgcgcccagtttcgatggc
gaattcgaagtgctcaagcaccgcattgttggcgagcgccacctaaaattgaccctgggc
ctgccagggatcagtggggtgattgatgctattcatttcaatgtggccgtggaagcgttg
cccagccgcattagcaaggtgcgtggggtttaccggttggaggtcaatgagttccggggg
cagcgtaatcctcagttgctgttcgagcatttgatcccgctttga
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