Alcanivorax borkumensis: ABO_1744
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Entry
ABO_1744 CDS
T00380
Symbol
ihfB
Name
(GenBank) integration host factor beta-subunit
KO
K05788
integration host factor subunit beta
Organism
abo
Alcanivorax borkumensis
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
abo03032
]
ABO_1744 (ihfB)
03036 Chromosome and associated proteins [BR:
abo03036
]
ABO_1744 (ihfB)
03400 DNA repair and recombination proteins [BR:
abo03400
]
ABO_1744 (ihfB)
DNA replication proteins [BR:
abo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ABO_1744 (ihfB)
Chromosome and associated proteins [BR:
abo03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ABO_1744 (ihfB)
DNA repair and recombination proteins [BR:
abo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ABO_1744 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
CAL17192
UniProt:
Q0VNQ6
LinkDB
All DBs
Position
complement(1986055..1986408)
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AA seq
117 aa
AA seq
DB search
MALTKSELIERIADRQAQLSPKDVELAVKTLIEQMADSLAGGGRIEIRGFGSFSLHFRAP
RVGRNPKTGASVELHGKYVPHFKPGKELRERVNESLSADSGEDVDNNGSNGNQAAAS
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggcattaaccaagtcagaattgattgagcgcatcgccgaccggcaagcgcagctgtcg
cccaaggatgtggaactggcagtaaaaacattgattgaacaaatggccgattctttggcc
ggcggtggtcgcattgaaattcgcggcttcggcagtttttccctccatttccgtgccccc
cgagtgggtcgcaatcctaaaaccggtgccagtgttgagctgcacggtaagtacgttcct
cacttcaaacctggtaaagagctgcgtgagcgggtcaacgaatcgctaagtgcagattcc
ggcgaagatgttgataataacggcagtaacggtaatcaagctgccgccagttag
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