Alcanivorax borkumensis: ABO_1820
Help
Entry
ABO_1820 CDS
T00380
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
abo
Alcanivorax borkumensis
Pathway
abo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABO_1820 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abo03400
]
ABO_1820 (recD)
Enzymes [BR:
abo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABO_1820 (recD)
DNA repair and recombination proteins [BR:
abo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABO_1820 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
NAT10_TcmA_helicase
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
PhoH
T2SSE
AAA_28
AAA_5
nSTAND3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CAL17268
UniProt:
Q0VNI0
LinkDB
All DBs
Position
2078553..2080490
Genome browser
AA seq
645 aa
AA seq
DB search
MQADLFSALTWEDALILLRDNNLLRDLDVAIARFLKQQCPQASYEVLLLAAFTSNQQASG
HLCLDLKNRALATQLWGTNPPPELVALLPGEPNNWLHELQQSTLVSQNGSTPLVLDGSRL
YLRRNWAREVAVADAIEQKLATANPLPEAPLREALAKLFPGSNNHTDWQQVACALASRSG
ISIITGGPGTGKTTTVVRLLGLLQSLAMADNQRLRIRLAAPTGKAAARLTESIGEQVGKL
HVDATVRDAIPTEVTTLHRLLGTRPDSRHFRHHGDNPLHADLVVVDEASMIDMDMMACLL
EALSPHTRLILLGDKDQLASVEAGAVMGDLCRHAHEGRYKQRTIEFVNNTCGADISDYQE
TDQNPGNALAQQTAMLRTNWRSKDSPGIGELARAVNEENLPQVRESFQRYPDSLYRQHLS
SDSQQLETLLLNGSNGHTGLRALFSAVATPPAQRHDFDDWAAGLLKQLTHQQLLSGLRSG
PFGVEQLNQRITHHLQQQDLAPEREWYPGRPVMMTRNDYQLGLMNGDVGLTLPLLETRKG
TAELLLRVAFQLPDGRIKWVLPSRLDGVETVYAMTVHKSQGSEFKHTLLVLPDAPHPLLT
RELIYTAVTRARDRFTLLEFGKSAVLDSAVKKRTWRASGLAERLS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctgacctgttctccgccctcacctgggaagacgcgctaatcctgctgcgcgac
aacaatttgctgcgcgatctggacgtggccattgcccgtttcctgaaacaacaatgcccg
caagcaagctacgaggtgttattactcgccgccttcaccagcaaccagcaagccagtggc
cacctgtgtctggatctaaaaaaccgcgcgttagccacccagctttggggcaccaacccg
ccgccggagctggtcgccctgttacccggcgagcccaataactggctccatgaactgcag
caaagcaccttggtcagccaaaacggcagcacaccattggtactggacggcagccgcctt
tacctgcgccgcaactgggcccgggaagtggccgtggccgacgccatcgagcaaaaactg
gccaccgccaatccactgcctgaagcccccctgcgcgaagccctggccaaattatttccc
ggttccaacaaccacaccgactggcaacaggtggcttgtgctttggccagccgcagcggg
atcagcatcattaccggcggccccggcaccggcaaaaccaccacagtggtacgcttgtta
ggcctgctgcaaagcctggcaatggccgataaccagcgcctgcgtattcgtctcgccgct
cccaccggcaaggctgcggcacggctcaccgaatccatcggtgagcaggtaggaaaactc
cacgtggacgccaccgtgcgcgatgccattcccaccgaagtgaccacactgcaccgcctg
ctcggcacccggccagacagccgtcactttcgccatcatggggataatccactgcacgca
gatctggtggtggtggatgaagccagcatgatcgacatggacatgatggcttgcctgttg
gaagccctgagcccacacacccggttgattctactcggcgataaggaccaactggccagc
gtggaagccggtgcggtgatgggtgacttgtgccgtcatgcccacgaaggtcgctacaag
caacgtactatcgaattcgttaacaatacctgtggcgcggatatcagtgactatcaggag
acagaccagaacccaggcaacgccctagcgcaacaaaccgccatgttgcgcaccaactgg
cgctccaaggacagccccggcatcggcgaactggcgcgggcagtaaacgaagaaaacctg
ccgcaggtgcgcgagagctttcaacgctacccggacagcctgtaccgccaacacctgagc
agcgatagccagcaactggaaaccctgctgctcaacggcagtaatggtcacacaggccta
cgggcactgtttagcgcggtggcaacaccacctgcacagcgacacgatttcgatgattgg
gccgccggcctgctcaaacagctcacccaccagcaactgctcagcggcctgcgcagcggt
cctttcggggtagaacaactcaatcaacgcatcacccaccacctacaacaacaggacctg
gcgccggaacgggaatggtaccccggtcgcccggtgatgatgacgcgcaacgattatcag
ctagggttaatgaatggcgatgtgggactgacgctgcccttacttgagaccaggaagggt
accgcggagctgctgttaagagtggcgttccagttgccggacgggcgcatcaagtgggta
ttacccagccgcctggacggggtagaaaccgtctacgccatgaccgtacacaaatcccaa
ggctcggaattcaagcataccctgctggtattacccgatgccccccaccccctgcttacc
cgagagttaatctacactgccgtcacccgggctcgggatcgcttcaccttgctggaattc
ggcaaatcggccgtgctggacagtgcggtgaaaaagcggacttggcgggcatcggggtta
gcagagaggttgagttaa
DBGET
integrated database retrieval system
