Alcanivorax borkumensis: ABO_1868
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Entry
ABO_1868 CDS
T00380
Symbol
csdA
Name
(GenBank) cysteine sulfinate desulfinase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
abo
Alcanivorax borkumensis
Pathway
abo00450
Selenocompound metabolism
abo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
ABO_1868 (csdA)
Enzymes [BR:
abo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
ABO_1868 (csdA)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
ABO_1868 (csdA)
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Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DRHyd-ASK
SelA
Vp20_capsid
Motif
Other DBs
NCBI-ProteinID:
CAL17316
UniProt:
Q0VND2
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All DBs
Position
2144292..2145500
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AA seq
402 aa
AA seq
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MDIQALRAQFPILDQQVNGKPLVYLDNGATTQKPVAVLNALDNYYRTVNSNVHRGAHYLS
DEATGQFEGARQTVADFLNASREEILWTKGTTESINMVAQCVARERLQPGDEVLIGTSEH
HANIVPWQQACAATGATLKVIPLHDDCSLNQAAFEQLLSSKTKIFAIGHASNALGTLNPV
KAMVAKAKAAGAITLVDGAQAVAHFPVDVQDLDVDFYAFSGHKLFGPTGIGVLYGRREQL
EAMPPYQTGGEMIETVSFEKSTWNQLPYKFEAGTPNIAGAIGLAAAIAWLRQQDRPALAA
HEDALLAHATERAQACDGLKIIGTAANKVSVLSFLLDGGHPADVGMLLDKQGIAVRTGHH
CTMPLMDTLGIPGTVRASFSIYNTLEEVDRLFEGLEKVKTFL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggatattcaggccctgcgtgcgcaatttccgattctggatcagcaagtcaacggcaaa
ccgctggtgtacttggataacggcgccaccacccaaaaaccggtagcagtgctcaacgca
ctggacaactattaccgcacggtgaactccaacgtacatcgcggcgcccactatctgagc
gacgaggccaccggccagtttgaaggcgcccgccaaaccgtggcggatttcctcaacgcc
agccgcgaagaaattttgtggaccaagggcaccaccgagtccatcaacatggtggcccag
tgcgttgcccgtgagcgcctgcagccgggcgacgaagtactgattggcaccagtgagcac
cacgccaatatcgtgccttggcaacaggcctgcgccgccaccggcgccaccctgaaagtg
atcccgctgcacgatgattgcagcctaaatcaggccgcctttgagcagttactcagcagc
aaaacaaagattttcgccatcggccatgccagcaatgcgctgggcaccctgaatccggta
aaagcgatggtcgccaaggcgaaagccgccggcgccattaccctggtcgacggcgctcaa
gcggtggcgcacttcccggtggacgtgcaggacctggacgtggatttctacgccttttcc
ggccacaagttatttggccccactggcataggcgtactctacggtcgccgcgaacagctc
gaggccatgccgccctaccagaccggcggcgaaatgattgaaacggtgagcttcgaaaaa
agcacctggaaccagctgccctacaaattcgaagccggcaccccaaacattgccggcgcc
atcggcctggccgccgccattgcgtggctgcgacaacaggaccgcccggcactggcggcc
cacgaagacgccctgctggcccatgccacagagcgggcccaagcctgcgacggcttgaaa
atcatcggtaccgccgccaataaagtcagtgtgctgtcctttctgttggatggcggccac
ccagccgatgtgggcatgctgctggacaaacaaggcattgccgtacgcaccggccaccac
tgcaccatgcccctgatggataccctaggcatacccggcactgttagggcctcattctcg
atttataatactctggaagaggtagatcgcttgttcgaaggactagagaaagtgaaaaca
tttctctga
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