Alcanivorax borkumensis: ABO_1959
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Entry
ABO_1959 CDS
T00380
Symbol
dacA
Name
(GenBank) D-alanyl-D-alanine-carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
abo
Alcanivorax borkumensis
Pathway
abo00550
Peptidoglycan biosynthesis
abo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABO_1959 (dacA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
abo01002
]
ABO_1959 (dacA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
abo01011
]
ABO_1959 (dacA)
Enzymes [BR:
abo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ABO_1959 (dacA)
Peptidases and inhibitors [BR:
abo01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
ABO_1959 (dacA)
Peptidoglycan biosynthesis and degradation proteins [BR:
abo01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
ABO_1959 (dacA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
CAL17407
UniProt:
Q0VN41
LinkDB
All DBs
Position
2239886..2241046
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AA seq
386 aa
AA seq
DB search
MRPQSFRFTVLALFALFGTAFSLLAQAQMVPRAPQIDAKGYLLMDATSGQIIVERNADQR
LPPASLTKMMTAYIAEAELQKGNISEKDMAPISVQAWQMGGSRMFVREGTRVPVGDLLRG
IIIQSGNDASVAMAEYIAGSEDAFADLMNQHANRLGMDNSHFMNATGWPAENHFTTAKDM
AILARAIVRDFPDHYDLYAKKEFTYNGITQQNRNLLLWRDPSVDGLKTGHTDEAGYCLVS
SAKKDGMRLIAVVMGTDSEGARARESQKLLTYGFRFFETYKAYSAGDVLDTVDVWMGEQN
QLRLGLAEDLVLTIPRESHESLKAEISVTPQLEAPIVEGQQYGSLTVRMNNDVLVKKPLV
ALEAVEEAGLFTKLWHHLMLFFKGLF
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccccagtcttttcgatttaccgttttagctctctttgctttatttggcaccgct
ttttccctcctggctcaagcgcaaatggtgccccgtgcgccacaaatcgatgccaaaggc
tacttgctgatggatgcaaccagcggccaaatcatcgtcgagcgtaacgcagatcaacgc
ctacctccggccagcctaacaaagatgatgacagcctacattgctgaagcggagctgcag
aaaggcaatatttccgagaaagacatggcgccaatcagcgttcaggcttggcaaatgggc
ggttcacgcatgttcgtacgcgaagggacccgagttccggtgggggacttgctgcgaggc
atcatcatccagtccggtaacgacgccagcgtggccatggccgaatacattgccggttcc
gaagatgcctttgccgatttgatgaaccaacacgctaaccgtctgggcatggacaacagc
catttcatgaacgccactggctggccggcggaaaaccatttcaccaccgccaaggacatg
gccattctagcccgcgccatcgtgcgagattttcccgatcactacgacctatacgccaaa
aaggaatttacctacaacggcatcactcaacaaaaccgcaacctgctactgtggcgtgac
ccctctgtggacggccttaaaaccggacataccgatgaagccggctattgcctggtctct
tccgctaaaaaagacggtatgcgtctaatcgccgtggtcatgggtaccgattctgaaggc
gcacgcgcccgtgaatcacaaaagctactgacctacggtttccgcttcttcgaaacctac
aaagcgtatagcgctggcgatgtccttgataccgtcgatgtatggatgggcgaacagaac
caacttcgtctaggcctagctgaagacttggtactgaccatcccccgtgaaagccatgaa
agcctgaaagcggaaatcagtgttactccacagctggaagcgcctatcgtggaaggccaa
caatacggctccctcaccgtccgcatgaacaatgatgtgctggttaaaaaaccattggtg
gcattggaagccgttgaagaagctggcctcttcaccaagctttggcatcaccttatgctg
ttcttcaaagggctgttctag
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