Alcanivorax borkumensis: ABO_2013
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Entry
ABO_2013 CDS
T00380
Name
(GenBank) TIM-barrel protein, putative, NifR3 family, putative
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
abo
Alcanivorax borkumensis
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
abo03016
]
ABO_2013
Transfer RNA biogenesis [BR:
abo03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
ABO_2013
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
DHO_dh
His_biosynth
NanE
SOR_SNZ
NMO
MR_MLE_C
TMP-TENI
Pterin_bind
Motif
Other DBs
NCBI-ProteinID:
CAL17461
UniProt:
Q0VMY7
LinkDB
All DBs
Position
2299530..2300570
Genome browser
AA seq
346 aa
AA seq
DB search
MQIGPYNLPNSLILAPMAGVTDRPFRRLCRDLGAGLLVSEMVTSDTRLWNSRKSRQRLDH
SGEPGPISVQIAGGEPAMLAEAARANVEHGAQIIDINMGCPAKKVCKRAAGSALLADPDL
VARILDAVTQAVNVPVTLKIRTGPDRDQRNAIDIARIAETAGIQALAIHGRTRADKFNGD
AEYATIKQVVDAVNIPIMANGDVDSPEKAKRVLESTGADGIMIGRAAQGNPWIFRDTLYY
LEHGSLPAAPLVTEVHDCVQQHLYELHDFYGEFMGVRIARKHLGWYTQNLPNGEDFRRGF
NTLENATDQRVAIEQFFQQISATTDRVRFGRYGEVSARKKNGALAA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcggaccctataacctgccgaactccttgattctagcccccatggccggcgtc
acggaccgcccattccggcgcttgtgcagagacctgggggccggcctgctggtgtcggaa
atggtgacctcggacacccgtctgtggaactctcgaaagtctcgccaacggttagaccat
agcggcgaaccaggccccatctcggtacagatcgccggcggagagccggcaatgctggca
gaggcggcccgcgccaacgtggagcatggcgcccagattattgacatcaatatgggctgc
ccggcgaaaaaagtgtgcaaacgcgccgcggggtctgccctgctagccgacccggaccta
gtcgcgcgcatcctcgatgcagtgactcaggctgtaaatgtccccgttaccctgaaaatc
cgtaccggccctgatcgcgatcagcgcaatgccatcgacattgcccgcatcgccgaaact
gcgggcattcaagcccttgccattcacgggcgcacccgcgccgacaagttcaacggtgac
gccgaatacgccactatcaaacaggtggtggatgcggtgaacattccgatcatggccaat
ggagacgtggatagtccggaaaaagccaaacgggtactggaatccaccggcgccgatggt
atcatgatcggccgcgctgctcagggtaacccgtggatcttccgggacaccctgtattac
ctcgagcacggctcgctgcccgcagcgccgttagtaacggaagtccatgattgcgtgcaa
cagcacctgtacgaactgcatgatttttatggtgagttcatgggggtacgtatcgcacgc
aagcacctgggctggtacacacagaacctgcccaatggggaagacttccggcgcgggttt
aacacactggaaaatgccaccgatcaacgcgtggcaatcgagcagtttttccaacagata
agcgccactaccgaccgagttcgcttcggtcgttatggcgaggtgtctgcccggaagaaa
aacggagccctggccgcatga
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